Setaria viridis (green foxtail): 117846828
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Entry
117846828 CDS
T07951
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03082
ATP-dependent chromatin remodeling
svs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117846828
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117846828
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117846828
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117846828
03036 Chromosome and associated proteins [BR:
svs03036
]
117846828
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117846828
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117846828
SWI/SNF complex
117846828
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117846828
PBAF complex
117846828
SWI/SNF complex
117846828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
117846828
NCBI-ProteinID:
XP_034583812
LinkDB
All DBs
Position
3:complement(3590692..3593430)
Genome browser
AA seq
255 aa
AA seq
DB search
MKTVSLGASRPSTVNFRMPTRDNLVPIRVDIEVDGQRYRDAFTWNPRDPDSEIISFAKRT
AKDLKLPANFVPQMLQSIQGQLAEFRSYEGQEMQIKEKIVPLKIDLRVNNTVIRDQFLWD
IGNLDSDPEEFARTLCDDLNVTDPEVGPAIAVSIREQLYEIASQSVSVMREKQLSKKGRR
APEFSSNSKAVNNAVDLFKYFGSKGSVIRKRKEWYLYEPVVDVVANEEDGKEEPNNSSRP
KKRAEEEKVASLQSL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtcagcctcggcgcctccaggccatccaccgtcaacttccgcatgccgacg
agggacaacctggtgccgatacgcgtcgacatcgaggtggacggccagcgctacagggac
gccttcacctggaacccgcgcgaccccgactcagagatcatcagcttcgcaaagcggacg
gccaaggacctcaagctgccggccaatttcgtcccccagatgctccagtccatccagggg
caacttgcggagttccgctcctacgaggggcaggagatgcagatcaaggagaagattgtg
cctctcaagattgacctccgagtgaacaacactgtaataagagaccagttcttatgggat
attggcaaccttgatagtgaccctgaggaatttgcaaggacgttatgtgatgatttgaac
gttacagatcctgaagttgggcctgcaatagctgtttccatccgtgagcagctttatgag
attgctagtcagagtgtctctgttatgagagaaaagcaattgtccaagaagggaaggcga
gcaccagaattttcttcgaatagcaaagccgtgaacaatgcagtggacttgttcaagtat
ttcggcagcaaaggaagcgtcattcggaaaaggaaggaatggtatctgtatgagcccgtt
gtcgacgttgtagctaatgaggaagatggaaaagaggagcctaataattctagtaggccg
aagaagcgagcagaagaagagaaagttgcaagtcttcaatccctttga
DBGET
integrated database retrieval system
