Setaria viridis (green foxtail): 117846882
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Entry
117846882 CDS
T07951
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117846882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svs04040
]
117846882
Ion channels [BR:
svs04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117846882
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
117846882
NCBI-ProteinID:
XP_034583887
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Position
3:complement(13808729..13813731)
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AA seq
710 aa
AA seq
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MSSDPSARSSPSSSAASPPNDARRRDQAGQATPPPGGEAIDTSGKSRRGRRRRVPWCPPG
LGAAWPLDPRARWVRQWNRAYLLACAAGLMVDPLFLYTVSVSGPLMCLFLDGWLAAAVTA
LRCAVDAMHVWNIATQLRLTRGTAGSKRAEGSSGDEEQQAAAAAGEEEDDDEEGADEVAR
KLPAGARSKKASVLDLFVILPVMQVVVWVAAPAMIRAGLTTPVMTVLLVAFLLEYLPKIY
HAVRFLRRMQGHSGYVFGTIWWGIVLNLMAYFVAAHAVGACWYLLGVQRASKCLKEQCQL
QAAAGGCARSGAVVACAAPLYYGGSPSAAAAGHLGAGRLAWARNAPARATCLASSSGDGS
GGYQYGAYKWTVMLVANPSRVERMLLPIFWGLMTLSTFGNLESTTEWLEIVFNILTITGG
LILVTMLIGNIKVFLNATTSKKQAMHTRLRAVEWWMRRKGLPRGFRHRVRQFERQRWAAT
RGVDECQIVRDLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFPKGET
IVREGDVVRRMLFIVRGHLACSQALRNGATSSCTLGPGNFSGDELLSWCLRRPFRDRLPT
ASATLVTLESTEAFGLDAADVKYVTQHFRYTFANEKVRRSARYYSPGWRTWAAVAVQLAW
RRYKHRKTLASLSFIRPRRPLSRCSSLGEEKLRLYTAILTSPKPNQDDDF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgacccctccgcgcgctcgtcgccttcctcctccgccgcgtcgcctcccaat
gacgcgcggcggagagaccaagcaggacaggcgacgccgccgccagggggagaggcgatc
gacaccagcggcaagagccgccggggccggcggcggcgcgtgccctggtgcccccccggc
ctcggcgcggcgtggccgctggacccgcgggcgaggtgggtccggcagtggaaccgcgcc
tacctcctggcctgcgcggcggggctcatggtggacccgctcttcctgtacaccgtgtcc
gtgagcggcccgctcatgtgcctcttcctcgacggctggctcgccgccgctgtcaccgcg
ctgcgctgcgcggtggacgccatgcacgtgtggaacatcgcgacgcagctccgcttgacg
cggggcacggcggggagcaagcgcgcggaggggagctcgggcgacgaggagcagcaggcg
gcggcggccgcgggggaggaggaggacgacgacgaggagggcgccgacgaggtcgcgcgc
aagctcccggcgggcgcgaggtccaagaaggcctcggtgctggacttgttcgtcatcctc
cccgtgatgcaggttgtggtgtgggttgcggcgccggcgatgatccgcgcggggctgacg
acgccggtgatgacggtgctgctggtggcgttcctgctcgagtacctgcccaagatctac
cacgccgtgcgcttcctccgccggatgcagggccactccggctacgtcttcggcaccatc
tggtggggcatcgtgctcaacctcatggcctacttcgtcgccgcccacgccgtgggcgcg
tgctggtacctgctcggggtccagcgtgccagcaaatgcctcaaggagcagtgccagctc
caggcggcggccggggggtgcgcgcgcagcggcgcggtggtggcctgcgcagcgccgctc
tactacggcggctccccctccgccgccgcggcggggcacctcggcgccggcaggctcgcg
tgggcccgaaacgcgccggcccgtgccacgtgcctcgccagcagcagcggcgacggcagc
ggtggctaccagtacggcgcgtacaagtggacggtgatgctggtggcgaacccgagccgg
gtggagcggatgctgctccccatcttctggggcctgatgacactcagcacgttcggcaat
ctggagagcacgacggagtggctggagatcgtgttcaacatcctgaccatcacgggcggt
ctgatcctcgtcaccatgctcatcggcaacatcaaggtgttcctgaacgcgaccacctcc
aagaagcaggcgatgcacacgcggctccgcgccgtggagtggtggatgcgtcgcaagggc
ctgccccgcgggttccggcaccgtgtgcgccagttcgagcggcagcgctgggctgccacc
cgcggcgtcgacgagtgccagatcgtgcgcgacctccccgagggcctccgccgggacatc
aagtaccacctgtgcctcgacctcgtccggcaggtcccgctcttccagcacatggacgac
ctcgtcctggagaacatctgcgacagggtcaagtccctcatcttccccaagggggagacg
atcgtgagggagggcgacgtggtgcggcggatgctgttcatcgtgcgtggccacctggcg
tgcagccaggcgctgcggaacggcgcgacgagcagctgcacgctggggcccggcaacttc
agcggcgacgagctgctgtcgtggtgcctgcgccggccgttccgggaccggctgccgacg
gcgtcggcgacgctggtgacgctggagagcacggaggcgttcgggctcgacgccgccgac
gtcaagtacgtgacgcagcacttccggtacaccttcgccaacgaaaaggtgcggcgcagc
gccaggtactactcgcccgggtggcgcacctgggctgccgtcgccgtgcagctggcgtgg
aggaggtacaagcaccgcaagacgctcgcgtcgctctccttcatccgcccgcggaggccg
ctgtcgaggtgctcctcgctcggggaggagaagctacggctctacaccgccatcctcacc
tcgcccaagcccaaccaagacgacgacttctag
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