Setaria viridis (green foxtail): 117846908
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Entry
117846908 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
117846908
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
117846908
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Av_adeno_fibre
Motif
Other DBs
NCBI-GeneID:
117846908
NCBI-ProteinID:
XP_034583921
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Position
3:8020505..8027274
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AA seq
701 aa
AA seq
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MGASIFIVVSWTMAPSMVVSWTMAAAPRWCLKLAVGASMLVLLVAAAPPQAAGGVTLRVD
PGQVVVDNGVVQVSLSRPQGQITGIRYGGGGDQNLLEYNASQGNSGGYWDVVWNYPGSDH
PGGTMDILDGTEFQVVSSSEEQVELSFRSSYNASRPNSVRLNVDKRLVMLRDSSGFYCYA
IFEHAREHPALNISVARLAFKLNAAKFNYMAISDGIQRYMPSAADRDPPRGVPLAYKEAV
LLVDPVEPEFRGEVDDKYQYSMDNEDNTVHGWIAGSNDDDPAAATGFWVVTPSNEFKNGG
PLKRELTSHVGPTSLSVFLGPHYVGRDMVIEFEEGEYWKKVLGPVFIYLNSGRPDSKRGL
WEDAKARAQAEVRKWPYDFPRSPDFAKAGERGSVTGRLWVRDGVANKQQQPAAMAYVGLA
APGQPASWATESKRYQFWTRAASDGSFSIGDVREGVYNLYAWVPGILGDYMHTFPVTVTP
AGGVDVGNLVFEPPRSGPTLWEIGVPDRSAAEFYVPDPDPRYSSRLFLTKDRYRQYGLWE
RYAALYPDSDLVFTVGESNHSTDWFFAHVTRKVVGGKGDTTVVPTTWQIRFHLDRVVAGG
NYTLRVALAASHMSSLQVQVNGGGGDGAAGTRGAPAAAFLMGDNNAIARHGIRGTEWSLD
LGIDGRLLIRGDNTIDITQASALNQFVGVMYDYIRLEGPST
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggagctagtatattcatcgtggtctcgtggaccatggcaccatccatggtggtctcg
tggaccatggccgccgctccgaggtggtgcctcaagctcgccgtgggagcgtccatgctg
gtgctgctcgtcgccgccgccccgccgcaagcagccggtggcgtcaccttacgcgtcgac
cctggccaggtagttgtagacaatggcgtggtgcaggtgtcgctgtcgaggccgcagggc
cagatcaccggcatccgctacggcggcggcggcgaccaaaacctgctggagtacaacgcc
agccaggggaactcgggagggtactgggatgtggtctggaactaccctggctcggatcac
ccaggaggaacgatggatattttggacggtacagagttccaggtcgtatcctcaagtgag
gagcaagtggagctttccttcaggagctcatacaacgcgtcgcgtccaaacagcgtacgg
ctaaacgtcgacaagaggcttgtgatgctgagagacagctccgggttctactgctacgcc
atcttcgagcacgcccgggagcacccagctctcaacatctccgtggctcgcctcgctttc
aaactaaacgccgccaagttcaactacatggcgatctcggacggcatccagaggtacatg
ccgagcgcggcggacagggacccaccccgcggcgtcccgctggcgtacaaggaggccgtc
ctgctggtggaccccgtggagccggagttcagaggggaggtggacgacaagtaccagtac
tccatggacaacgaggacaacacggtgcacgggtggatcgccggcagcaacgacgacgac
ccggcggcggcgacgggcttctgggtcgtcactcccagcaacgagttcaagaacggcggg
ccgctcaagcgggagctcacctcccacgttggccccacctccctctcggtgtttctgggg
ccgcattacgtcggcagggacatggtgatcgagttcgaggagggcgagtactggaagaag
gtgctgggccccgtcttcatctacctgaactccggccgcccggactccaagagaggcctc
tgggaggacgccaaggcgcgggcgcaagcggaggtgaggaaatggccctacgacttcccc
cggtcgccggacttcgcaaaggcaggcgagagaggctccgtcacggggaggctctgggtc
agagacggcgtcgccaacaagcagcagcagccggctgcgatggcctacgtcgggctcgcc
gcgcctggccaacctgcctcctgggccacggagagcaagaggtaccagttctggacgagg
gccgcctccgacggcagcttcagcatcggcgacgtccgggaaggggtgtacaacctgtac
gcctgggtccccgggatccttggtgactacatgcacaccttccccgtgacggtaactccg
gcgggcggcgtcgacgtcggcaacctcgtgttcgagcccccgaggtcgggccccacgctg
tgggagatcggcgtcccggaccggtcggcggcggagttctacgtccccgaccccgacccg
aggtactccagcaggctcttcctgaccaaggacaggtacaggcagtacggcctgtgggag
aggtacgccgccctctaccccgacagcgacctcgtgttcaccgtcggcgagagcaaccac
tccacggactggttcttcgcgcatgtcacaaggaaggtcgtcggcggcaagggtgacacc
acggtggtgccaacgacatggcagatacgcttccacctggaccgcgtcgtagcgggcggc
aactacacgctgcgcgtcgccctcgcggcgtcgcacatgtcgagcctgcaggtgcaggtg
aacggcggtggcggtgacggcgccgccggcacgcgcggcgcgccggcggcggcgtttctg
atgggcgacaacaacgccatcgcgcggcacggcatacgcggcacggagtggagcctggac
ttgggcatcgacggccgcctgctcatccgaggcgacaacaccatcgacatcacccaggcg
agcgccctgaaccagttcgtcggggtcatgtacgactacattcgcctcgagggcccttcc
acatag
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