Setaria viridis (green foxtail): 117846963
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Entry
117846963 CDS
T07951
Name
(RefSeq) RAN GTPase-activating protein 2
KO
K14319
Ran GTPase-activating protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117846963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117846963
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117846963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_14
LRR_NXF1-5
Cwf_Cwc_15
LarA_C
Motif
Other DBs
NCBI-GeneID:
117846963
NCBI-ProteinID:
XP_034583982
LinkDB
All DBs
Position
3:complement(19956835..19960403)
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AA seq
548 aa
AA seq
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MDSTAQDFHPRTFSIKLWPPSESTRLMLVERMTTNLSTESIFSRKYGLLGKEEAHENAKR
IEQLCFASADEHFKKEPDGDGSSAVQLYAKETSKMIMEVLKKGPMTTAEPEAPVADTPIE
PGDTVLDISGGKRAFIEADEAKELLSPLTEPGNSYKRICFSNRSFGVDAANVAGPILESV
KNQLTEVDISDFVAGRPEDEALDVMRIFSKALEGSVLRYLNISDNALGEKGVRAFSELLK
SQEKLEELYVMNDGISEDAAKALSELIPSTENLKVLQFHNNMTGDEGAVYVAEMVKRSPN
LESFRCSATRIGADGGVALSEALGTCTHLKKLDLRDNLFGVDAGIALSKTLPKLPDLVEL
YLSDLNLENKGTIAIVNALKQSAPQLEVLELAGNEINAKAAPALAECITAMQSLKKLTLA
ENELKDDGAVIIAQSLEDGHADLKELDVSTNMLQRVGARCFARAVANKPGFVQLNMNGNF
ISDEGIDEVKDILKAGKNSLDVLGSLDENDPEGEPDEEEEDDDEDAKDDDDEDGLDLKLQ
NVKVEQDG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacagcgcaagacttccatcccaggacattctccatcaagctgtggccacca
agtgaaagcacacgcctcatgcttgtagagaggatgaccacgaacctgtccactgagtcc
atattttcccgcaagtatggacttttgggcaaggaagaggctcatgagaatgctaaaagg
atagagcagctgtgctttgcgtcggcagatgagcattttaagaaggaacctgatggtgat
gggagttctgctgtccagctgtatgctaaagaaaccagcaaaatgattatggaagttctt
aagaaaggcccaatgactactgctgaaccagaagcacctgtagctgatacacctattgag
cctggtgatactgtattagatatatctggtggcaagcgtgcctttatagaggcagatgaa
gcaaaggaattgctgagtccacttactgaaccaggaaactcgtataaaaggatttgcttt
agcaataggagcttcggtgttgatgctgctaatgttgctggacctattcttgagtcagtt
aagaatcagcttacggaggtagatatatctgattttgttgcaggaaggcctgaggatgaa
gcccttgatgtgatgcgcatattctccaaagcactagagggttctgtactgagatatctg
aacatctctgataatgcattgggtgagaagggtgtcagggcattcagtgagctcctgaag
tcacaggaaaaactggaagagctctatgtcatgaacgatggcatatcagaggacgctgca
aaagctctttctgagcttattccttcaaccgagaatcttaaggttctccagttccataac
aacatgactggagatgaaggtgctgtgtatgttgctgagatggttaagcggtctccaaat
ctagagagtttcaggtgctcagcaacaaggataggagctgatggtggtgttgctttgtct
gaggcattagggacatgcacgcatctgaagaaacttgatctcagggataacttgttcggt
gttgatgcagggattgctctcagcaaaacccttccaaagcttcctgatcttgttgagctt
tacctcagtgacctcaatcttgagaataagggtaccatagcaattgtcaatgccctcaaa
cagtctgcacctcagttggaagtccttgaattagctggaaatgaaataaatgccaaagca
gccccagctttagcagaatgcataacagctatgcagtcattaaagaagctgaccttggct
gagaatgaactcaaggatgatggtgctgtgattattgcacaatcattggaagatggccat
gcagatctgaaggagcttgatgtgagcacaaacatgcttcagcgggttggagctcgctgc
tttgcacgggcagttgcaaataagcctggttttgtgcaactgaacatgaatggcaatttc
atctccgatgaagggattgatgaggtgaaagacattttgaaggctggcaagaattcactg
gatgtcctgggctcactagatgagaatgatcctgagggagagcctgatgaggaggaggag
gacgacgacgaagatgccaaggatgatgatgacgaggatgggctggatttgaagctgcag
aacgtaaaggttgagcaggatggctag
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