Setaria viridis (green foxtail): 117847014
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Entry
117847014 CDS
T07951
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117847014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117847014
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
GTPases
117847014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Cue1_U7BR
AIG1
Motif
Other DBs
NCBI-GeneID:
117847014
NCBI-ProteinID:
XP_034584037
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All DBs
Position
3:48621931..48625805
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AA seq
596 aa
AA seq
DB search
MAGGGKKENGEGLGRALIRQRNKAAAAAKERGEALAFGRRRAMPLESVIDVSDIDAVLQR
AAEADQLAEAASVSSDSDLVIDLDATGETDEERRRLRKEQEALHASSLSVPRRPPWHNQM
TVEELDANERRAFLVWRRNLARLEENDKLVLTPFEKNIDIWRQLWRVLERSDLLVMVVDA
RDPLFYRCPDLEAYAKEIDEHKRTMLLVNKADLLPLNVRKRWAEYFKAHDILYVFWSAKA
ATATLEGKKLSGYSEEESASLDLDTKVYGRDELLMRLQAEAESIVAQRKTLTAEVDHDVS
SSDSVSSVAKHVVVGFVGYPNVGKSSTINALVGEKRTGVTHTPGKTKHFQTLIISEELTL
CDCPGLVFPSFSSSRHEMVACGVLPIDRMTKHREAIQVVADRVPRNILEQIYKITLPKPK
PYESQSRPPTAAELLRAYCSSRGHVSHAGLPDETRAARQILKDYIDGKIPHFELPPGVTD
IETECEVIAISEGPTTSAANESDADDLDEEDEDTADPAEPDMRDVLDDLESFDLANEGSK
TATKKKETSHKHHKKPQRKKDRSWRVGNDGGDGTAVVRVFQKPAVNLPAVNASGRV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtggcgggaagaaggagaatggggagggcctgggccgggcgctgatccggcag
cggaacaaggcggcggcggccgccaaggagcgcggcgaggcgctggccttcgggcgccgc
cgcgcgatgccgctcgagtccgtcatcgacgtcagcgacatcgacgccgtgctgcagcgg
gccgcggaggccgaccagctcgccgaggccgcgtccgtctcctccgactccgacctcgtc
atcgacctggatgcgacgggggagaccgacgaggagaggcggcggctgcggaaagagcag
gaggccctgcacgctagcagcctcagtgtcccgcggcgtccgccatggcataatcagatg
actgtagaggagcttgatgcaaacgagaggcgggcgttccttgtgtggcgcaggaatctt
gcgagattggaagagaatgacaaacttgtgctgacaccctttgagaagaatattgacatc
tggagacagctctggagagtgcttgaacgcagtgatttgctggttatggtggttgatgct
cgagatcccttgttctaccgctgccctgatcttgaggcatacgcaaaggaaattgatgaa
cacaagagaacaatgcttctagttaacaaggctgatctgctgccgttaaatgtcaggaag
agatgggctgagtattttaaggcacatgatattctctatgttttctggtcagctaaagcc
gctactgccacacttgaaggcaaaaagttaagtggatactctgaagaagaatctgcttca
cttgatttggataccaaggtatatggcagggatgaactcttgatgaggttgcaagctgaa
gcagaatctattgtagcacaaaggaagaccttaactgctgaagtggatcatgatgtcagt
tcttcagattctgtttcgtcagtggctaagcatgtagttgttgggtttgttggttatcca
aatgttggaaagagttccaccataaatgctttggttggtgagaagaggactggtgttact
cacacacctggcaagactaaacatttccagacactgataatctctgaagagctcactctg
tgtgattgccctggtctggtcttcccttctttctcaagctcaaggcatgagatggtggca
tgtggtgtcttgccgattgataggatgacaaagcatcgggaagctattcaggtggtagca
gatcgtgtcccaagaaatattcttgagcagatttacaaaatcaccttgccaaagccgaag
ccgtacgagtcgcagtctcggccaccaactgcagcggagctgttgcgggcctactgttca
tccagagggcatgtcagccatgctgggctgcctgatgagaccagggctgctcgacagata
ctgaaggattacattgatggcaaaatcccgcactttgaactccctcctggtgtaacagac
atcgaaacagaatgtgaagtaatcgccatatcagaaggtccaactacatcagcagcaaat
gaatcagatgctgatgatttggatgaagaggatgaggacacagctgatccagcagaaccg
gacatgagagacgtcctggatgaccttgaatcttttgacctggcaaatgaaggatctaaa
accgccacaaagaagaaagagacgtcccacaagcaccacaagaagccccagcggaagaag
gatcggtcctggagggtcggcaatgatggcggcgatggaacagcagtcgtaagggtgttc
cagaagcccgctgttaatttgccagctgtcaatgcaagcggcagggtctag
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