Setaria viridis (green foxtail): 117847180
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Entry
117847180 CDS
T07951
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117847180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117847180
03016 Transfer RNA biogenesis [BR:
svs03016
]
117847180
03012 Translation factors [BR:
svs03012
]
117847180
04131 Membrane trafficking [BR:
svs04131
]
117847180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117847180
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117847180
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117847180
Translation factors [BR:
svs03012
]
Eukaryotic type
Elongation factors
117847180
Membrane trafficking [BR:
svs04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117847180
Exosome [BR:
svs04147
]
Exosomal proteins
Proteins found in most exosomes
117847180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
SRPRB
AAA_22
Motif
Other DBs
NCBI-GeneID:
117847180
NCBI-ProteinID:
XP_034584234
LinkDB
All DBs
Position
3:complement(22381538..22384743)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIAFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGIIKPGMLVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELITKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagtcccacatcaacatcgtggtcattggccacgtcgactctggcaag
tcgaccaccaccggccacctgatctacaagcttggaggtattgacaagcgtgtgatcgag
aggttcgagaaggaggccgctgagatgaacaagaggtccttcaagtatgcgtgggtgctt
gacaagctcaaggctgagcgtgagaggggtatcaccattgatattgccctgtggaagttc
gagaccaccaagtactactgcacagtcattgatgcccctggacaccgtgacttcatcaag
aacatgatcactggtacctcccaggctgactgtgctgtcctcatcattgactccaccact
ggtggttttgaggctggtatctccaaggatggccagacacgtgagcatgctctccttgct
ttcactcttggagtgaaacagatgatttgctgctgcaacaagatggatgccaccactccc
aagtactccaaggcccgttatgatgagattgtgaaggaagtctcctcctacctgaagaag
gtgggatacaaccctgacaagattgccttcgtcccaatctctggttttgagggtgacaac
atgattgagaggtccaccaaccttgactggtacaagggcccaaccctgcttgaggctctt
gaccagatcaacgagcccaagaggccttcggacaagcccctccgtcttccccttcaggat
gtgtacaagatcggtggtattggaaccgtccctgttggccgtgttgagaccggtatcatc
aagcctggtatgcttgtcacctttggtcccactggcctgactactgaggtgaagtcagtc
gagatgcaccacgaggctctccaggaggcccttcctggtgacaacgttgggttcaacgtg
aagaacgttgctgtgaaggatctcaagcgtgggttcgtggcctccaactccaaggatgac
cctgccaaggaggctgccagcttcacctcccaggtcatcatcatgaaccaccctgggcag
attggcaatggctacgccccagtgctggactgccacacctcccacattgctgtcaagttt
gctgagctcattaccaagattgacagacgatctggtaaggagcttgagaaggaacccaag
ttcctgaagaatggtgatgctggtatggtgaagatgattcccactaagcccatggtggtg
gagaccttctccgagtaccctcctctgggtcgctttgctgtccgtgacatgaggcagacg
gtagctgttggagtcatcaagagtgtggagaagaaggaccctaccggcgccaaggttacc
aaggctgcagccaagaagaaatga
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