Setaria viridis (green foxtail): 117847271
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Entry
117847271 CDS
T07951
Name
(RefSeq) nuclear ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117847271
Enzymes [BR:
svs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
117847271
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
117847271
Prokaryotic type
117847271
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
117847271
NCBI-ProteinID:
XP_034584345
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Position
1:876110..878276
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AA seq
309 aa
AA seq
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MAKVSESAAEAASTAAAPPLTSASAPPSRPKAKHRLEIEGYPVEGLSIGGQETCVIFPTL
SLAFDIGRCPQRAISQEFLFISHGHLDHIGGLPMYVATRGLFRLRPATIFVPACLRDLVE
RLFEVHRAIDQSELKHNLVPLEVGEEYELRRDIKVRAFRTYHAIPSQGYVIYSVKQKLKQ
EFIGLPGSEIKRLKLSGVEITNTVSTPEIAFTGDTTSDFILDPDNADVLGAKILVVESTF
LDDSISVEHAREYGHTHLFEIASQSDKLGNKAILLIHFSARYTAEEIDAAINRLPPSFRS
RVYALKEGF
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggtcagcgagtccgcggcggaggctgcgtccaccgccgccgcccctcctctt
acttccgcttccgcgccgccatcgaggccgaaggcgaagcaccggctggagatcgagggg
taccccgtggagggcctctccatcggcggccaagagacctgcgtcatcttcccgacgctg
agcctcgccttcgacatcggccggtgcccgcagcgcgccatctcgcaggagttcctcttc
atctcccatgggcatctcgaccacatcgggggcctccccatgtacgtggccacgcggggt
ctcttcaggctgcgcccggccaccatcttcgtcccggcgtgcctccgggacctcgtggag
cggctgttcgaggtgcaccgcgccatagaccagtcggagctcaagcataacttggtcccc
ctcgaggtcggggaggagtacgaattgaggagggacatcaaggtcagggctttcaggacc
taccacgccatacccagccaggggtatgtcatatactcggtgaagcagaagctcaagcag
gagttcattggtctcccagggagcgagattaagcggttgaagttatcaggtgtggagatc
acgaatacggtgtccacccctgagattgctttcacgggagatacgacatcagatttcatt
cttgatccagacaatgcagatgtgttgggggcaaaaattcttgttgtcgagagtactttt
ctagacgactccatttcggttgagcatgcaagagaatatgggcacacacacttatttgag
atagcaagccagtctgacaagcttggaaacaaagctattctactcattcacttttctgct
cgttacactgcagaggaaattgatgcagcaataaacaggttgccaccatctttccgaagc
agagtttatgcgttgaaggaaggcttctaa
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