Setaria viridis (green foxtail): 117847299
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Entry
117847299 CDS
T07951
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00300
Lysine biosynthesis
svs00470
D-Amino acid metabolism
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs01230
Biosynthesis of amino acids
Module
svs_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
117847299
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
117847299
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
117847299
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
117847299
NCBI-ProteinID:
XP_034584376
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Position
3:complement(47249893..47254757)
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AA seq
493 aa
AA seq
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MAAAANLLSRSLLPALNPNPSGHPSRGGSPAAAAVSFPRRHARLPSVRASVSATSPSPPP
QPTAAAAAAPKHCFRRGADGYLYCEGVRVEDAMAAAARSPFYLYSKPQVLRNFEAYREAL
GGLRSVVGYAVKANNNLPVLRLLRELGCGAVLVSGNELRLALQAGFDPARCIFNGNGKTL
EDLKLAAESGVFVNVDSEFDLENIVRAAKATGKKVPVLLRINPDVDPQVHPYVATGNKTS
KFGIRNEKLQWFLDSIKSYSNDIKLVGVHCHLGSTITKVDIFRDAATLMVNYVDEIRAQG
FELEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFV
NKVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIELVSPPSPGAEVATFDIVGPVCES
ADFLGKDRELPTPDEGVGLVVHDAGAYCMSMASTYNLKLRPPEYWVEEDGSIVKIRHEEK
LDDYMKFFDGLPA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgaacctgctctcgcgctcccttctccccgccctaaaccctaaccca
tccgggcacccgagccgcggcggtagcccagccgccgccgccgtttccttcccgcgccgc
catgcccgcctgccctccgtgcgcgcctccgtctccgcgacctccccatccccaccgccg
cagccgacagccgcggcggcggcggccccgaagcactgcttccgccgcggcgccgacggg
tacctgtactgcgagggggtgcgggtggaggacgcgatggcggcggcggcgcggagcccg
ttctacctctacagcaagccgcaggtcctccgcaacttcgaagcctaccgcgaggcgctc
ggggggctccgctccgtcgtggggtacgccgtcaaggccaacaacaacctccccgtgctg
cgcctcctgcgcgagctcggctgcggcgccgtcctcgtcagcggcaacgagctccgcctc
gccctccaggcggggttcgaccctgcaaggtgtatatttaatggaaatgggaagacgttg
gaagatcttaaattagctgctgagagtggagtatttgtaaatgtggacagcgaatttgat
ttggagaatattgtcagagctgcaaaggctacaggaaagaaagtgcctgttttgcttaga
ataaacccagatgtggatccccaggtacatccatatgttgctactggaaataaaacttcc
aaattcgggatccgcaatgagaaattacaatggtttttggattctatcaagtcatactcg
aatgatatcaaattggttggtgttcattgtcatctggggtctactattacaaaggtcgat
atattcagggatgctgcaactcttatggtgaattatgttgatgaaattcgagcacaaggt
tttgagttggagtacctgaatattggaggtggtttgggaatagattaccaccacaccgat
gcagtcttgcctacaccaatggatctcatcaacactgtgcgagaattagttctctctcga
gatcttactcttatcattgaacctggaagatccttgattgctaatacttgttgcttcgtc
aataaagtaactggtgttaaatccaacggtacaaagaatttcattgttgttgatggcagc
atggcagaacttatcagacctagtctgtatggagcataccagcatatcgaactggtctct
cctccctctcctggtgctgaagtagcaacctttgatattgttggaccagtttgtgagtct
gcagatttcctcggaaaagatagggagcttccaacacctgatgagggagttggacttgtg
gttcatgatgcaggtgcctactgcatgagcatggcttccacctacaacctgaagttgaga
ccgccggagtactgggtggaagaggatggttctatcgttaagatcaggcatgaagagaag
cttgatgactacatgaagttctttgatggtcttcctgcttag
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