Setaria viridis (green foxtail): 117847584
Help
Entry
117847584 CDS
T07951
Name
(RefSeq) FACT complex subunit SSRP1-B
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117847584
03036 Chromosome and associated proteins [BR:
svs03036
]
117847584
Transcription factors [BR:
svs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
117847584
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
117847584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
117847584
NCBI-ProteinID:
XP_034584697
LinkDB
All DBs
Position
3:7215694..7221301
Genome browser
AA seq
655 aa
AA seq
DB search
MTDGHHHHFNNISLGGRGGFNPGQFKLYSGGLAWKKHGGGKIIEVDKADITSVVWMRIPK
SYQLNVGMKGGLFHRFFGFRQQDVSNLSNFIQRSTGISPEEKQLSISGHNWGGVEIDGTR
LCFNVGEKEAFEVSPADVSQAQMQGKTDVVLEFHVDDTTASNEKDSLADLSFHVPTSNAQ
FIGDERHTSAQMLCQEIRFCMGSPSEAAIVTFDGIAILTPRGRYSVELHRSFLRLQGQAN
DFKIQYSSILRLFILPKSQNPHTFVVITLDPPIRKGQTLYPHIVIQFVTEAVVERELALS
EQVLAEKYKDRLQGSYRDQIHVVFSNILCGLSGAKVTRPSTFRSCQHGYAVKSALKAEDG
LLYPLEKAFFFLPKPPTLILYKEIEYVLFQHHGAGANISSQYFDLLVKLKNDQEQLFSNI
QRIEYQNLFNFISGKRLKIRILGDGRRRTGGVTTALESTDDDSVDPYLEQIKNQACNEES
DEEDEDFVADKDDSGSPSDDSEEEGSDASMSGGENENSSKMEASRSKLHVKRKLNNGSDE
GSNKKTKRKKEQKSGSDEGSQKKKTERKKDPNAPKRAIVPFMYFSKAERANIKNSNPELT
TTDIAKKLGERWQKMTADERQPYVEQSRVDKQRYEEEYAAYRGTAAQQGPGDGSE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccaccaccaccacttcaacaacatctccctcggcggccgcggcggcttc
aaccctggacagtttaaactttattcaggaggacttgcatggaagaaacatggtggagga
aagattattgaggttgataaagctgatatcacttctgtagtatggatgaggatccctaaa
tcttatcaactcaatgttgggatgaagggggggctctttcacaggttctttggcttccgt
caacaggatgttagcaacctgagtaacttcatacaaagaagcacgggaatctcaccagaa
gagaagcagctttccatcagtgggcataactggggtggagttgaaatcgatggaactagg
ctttgctttaatgttggtgagaaggaagcatttgaagtctctccagcagatgtatcgcag
gctcagatgcaagggaaaacagatgttgttctcgagttccatgttgatgataccactgca
tctaacgagaaagattcgctagcggacttaagttttcatgtaccaacttcaaatgctcaa
tttattggggatgagcgtcatacttcagctcagatgttgtgccaggagattagattttgc
atggggagcccctcagaagcggctatagttacatttgacggaattgcaatcctcacacca
agaggtcgatacagtgttgagcttcatcggtcattcttgcgactccaaggacaagctaat
gatttcaaaatccagtatagcagtattcttcgcctctttattttgccaaagtcacaaaat
cctcatacttttgtggtcatcacacttgatccaccaattcgaaaaggacaaacattatat
ccccacattgttattcagtttgtgacagaggcagtggttgaaagggaactggcattgagt
gagcaagttttggctgaaaagtacaaggataggcttcagggctcttacagggatcaaata
catgtggtattctccaacatcctttgtggcctatctggtgctaaagtgacaaggccaagt
acatttcgcagttgccaacatggatatgcagtcaaatcagcacttaaagctgaagatggt
ttgctctatccacttgaaaaggccttcttctttctgccaaagccccctacactcattctt
tataaggagatcgagtatgtgttgtttcagcatcatggtgctggtgctaatatatcatct
caatattttgacctcttggtcaagctgaaaaacgatcaagaacaactgttcagtaacatc
caaaggattgaatatcaaaacttgttcaacttcattagtggcaagcgtttgaaaattcgg
attcttggagatggtcgaaggagaactggtggtgttacaactgctctagagagcactgat
gatgattctgtcgatccatatctggagcaaataaaaaatcaagcttgtaatgaggaaagt
gatgaagaggatgaagattttgtggcagataaagatgatagtggttctcctagtgatgat
tctgaagaggaaggctctgatgctagtatgagtggaggtgaaaatgagaattcttccaag
atggaagctagtagatcaaagctgcatgtgaaaagaaagctgaataatgggtctgatgaa
ggttctaataaaaaaacaaagagaaagaaagagcaaaagagtgggtccgatgaaggttct
cagaagaaaaagacagagaggaagaaagatcccaatgcccctaaaagagccatagttcca
ttcatgtacttctcgaaggctgagcgagctaatataaagaacagcaaccctgaactgact
accacagatattgcaaagaagcttggggagagatggcaaaagatgacagccgatgagaga
caaccatacgtagagcaatcccgagtcgacaagcaacgttacgaggaagagtatgccgcc
taccgcggaacagccgctcagcaaggccccggcgatggatcggagtga
DBGET
integrated database retrieval system
