Setaria viridis (green foxtail): 117847585
Help
Entry
117847585 CDS
T07951
Name
(RefSeq) FACT complex subunit SSRP1-B
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117847585
03036 Chromosome and associated proteins [BR:
svs03036
]
117847585
Transcription factors [BR:
svs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
117847585
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
117847585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
117847585
NCBI-ProteinID:
XP_034584698
LinkDB
All DBs
Position
3:7227471..7232742
Genome browser
AA seq
638 aa
AA seq
DB search
MMDGHHFNNISLGGRGGGNPGQFKLYSGGLAWKKQGGRKIIEVDKADITSVTWMRIPKSY
QLSVGTKEGLCYRFFGFREQDVSSLTNYIQKSTGITPQEKQLSISGQNWGGIEINGNVLC
FNVGSKEAFEVSLADVSQSQMQGKTDVVLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFI
GDEHRTSAQMLWQAISVQIDGGGSSEAAVATFDGIAILTPRGRYSVELHQSFLRLQGQAN
DFKIQYSSILRLFVLPKSHNPHTFVVITLDPPIRKGQTLYPHIVIQFETETIVERKLTLS
EEVLAEKYKDRLQSSYRGLIHEVFSMVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDG
LLYPLEKAFFFLPKPPTLISHDEIEYVEFERHGTGGASISSHYFDLLVKLKNDQEHLFRN
IQRNEYHNLFNFISGKHLKILNLGDGQGRAGGVTAVLQSTDDDSVDPHLERIKNQAGNEE
SDEEDEDFVAEKDDSGSPTDDSDEDGSDASLSGEEKEKSSKKEASTSKPPVKKKQKSVPD
EGSQKKKPKKKKDPNAPKRAIAPFMYFSKAERPNIKSSNPELATTEIAKKLGERWQKMSA
EERQPYIEQSQVDKQRYAEESAAYRGASTQQGSGGGSD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatggacggccaccacttcaacaacatctccctcggaggccgcggcggcggcaaccct
gggcagttcaaactttattcaggaggactggcgtggaagaagcaagggggacgaaagatc
atcgaggttgataaagctgatatcacatctgtgacatggatgagaattcctaaatcttat
cagcttagtgttgggacaaaggagggcctctgttacaggttctttggcttccgtgaacag
gatgttagtagcctgactaactacattcaaaagagcacaggaatcacaccacaggagaag
cagctttccatcagtgggcagaactggggtggaattgaaataaatgggaatgtgctttgc
tttaatgtcggttcaaaggaagcatttgaagtctctctagcggatgtttcacaaagtcag
atgcaaggaaaaacagatgttgtccttgagttccatgtagatgatacaactggggctaat
gagaaagattcactcatggatttaagtttccatgtaccaacttcaaatactcaattcatt
ggagatgagcatcgtacgtcagctcagatgctatggcaagctatctcggttcaaattgac
ggaggtggctcctcagaggcggctgttgctacatttgatggaattgcaattcttacacca
agaggtcgatatagtgtcgagcttcatcagtcattcttgcgactccaaggacaagctaat
gatttcaaaatacagtacagcagtattcttcgtctctttgttttaccaaagtcacacaac
cctcatactttcgtggttatcacacttgatccacctattcgcaaaggacaaacattatat
cctcacatcgttattcagttcgagacagagacaattgttgaaaggaaactgacattaagt
gaggaggttttggctgaaaagtacaaggatagacttcagagctcttataggggtctaata
catgaggtattctccatggtccttcgtggcttatctggtgctaaagtgacaaggccaagt
acgttccgcagttgccaagatggatatgctgtcaagtcatcacttaaagctgaagatggt
ttgctttatccacttgaaaaggccttcttctttctgccaaagccccctacactcatttct
catgatgagattgagtatgttgagtttgagcgtcatggtactggtggtgctagtatatca
tctcattattttgacctcctagtaaagcttaaaaacgatcaagaacatctcttcagaaac
atccaaaggaatgaataccataacctgttcaatttcatcagcggtaagcacttgaaaatt
ctaaatcttggagatggtcaaggtagagctggtggtgttactgctgttcttcagagcacc
gatgatgattcagttgatccacatctagagaggattaaaaatcaggctggtaatgaggaa
agtgatgaagaggatgaagattttgtggcggagaaggatgatagtggatctcctactgat
gattctgatgaggatggctctgatgctagtttgagcggggaagaaaaggagaaatcttcc
aagaaggaagctagtacctcaaagccacctgtgaagaagaagcagaagagtgtgcctgat
gaaggttctcagaaaaagaagcctaagaagaagaaagatccaaatgcccctaaaagagcc
atagctccattcatgtacttctcaaaggctgagcgacctaatattaagagcagcaaccct
gaactagctactacagagatcgcgaagaagcttggggagcggtggcaaaagatgtcagct
gaggagaggcagccatacattgagcagtcccaggtcgacaagcaacgctatgcagaagag
tctgctgcctaccgtggtgcaagtactcagcagggctccggaggtgggtcggactga
DBGET
integrated database retrieval system
