KEGG   Setaria viridis (green foxtail): 117847629
Entry
117847629         CDS       T07951                                 
Name
(RefSeq) protein ELC
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03250  Viral life cycle - HIV-1
svs03272  Virion - Hepatitis viruses
svs04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117847629
   03272 Virion - Hepatitis viruses
    117847629
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117847629
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117847629
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svs04147]
    117847629
Membrane trafficking [BR:svs04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    117847629
Exosome [BR:svs04147]
 Exosomal proteins
  Proteins found in most exosomes
   117847629
SSDB
Motif
Pfam: UEV Vps23_core RWD DUF1707
Other DBs
NCBI-GeneID: 117847629
NCBI-ProteinID: XP_034584760
LinkDB
Position
3:5653324..5654769
AA seq 338 aa
MATAAAPAGTVVLVDAALAPYEHPDLRWLVRKHVLAVLQEFPTLSPSVDTYTSDDGASAV
LLNARGPLAVSPALPPILLTVWLPREYPYRPPLVFAFPAAPSAALVPDHPFVDHRTGRVH
RTLPYLEGWSVPRSSLAGLVRSLVAALRMCHPLTTASFGFAAGDARTTRAGATPVEEERR
RMHAVLVDKLAARLGRDAAAFRGGVDEDIHAMSSMQAGLRTRGDAMDRAVRDLEEERTRL
ERAVTASLAHRGKLLAWLHKTSPAPDPGVALAPHAAAGRGDAPRWLESKAAELAADDAID
TLGRALENGELSFQEYIKRVKILAREQFFHCYAASKST
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcgactgcggcggcgcccgccggcacggtggtgctggtagacgcggcgctggccccg
tacgagcaccccgacctccggtggctcgtccggaagcacgtcctcgctgtcctccaggag
ttccccaccctctcgccctccgtcgacacctacaccagcgacgacggcgcctccgccgtg
ctgctcaacgcgcgggggcccctcgccgtctcccccgccctgccgccgatcctcctcacc
gtatggcttcccagggagtacccctaccgtccgccgctcgtcttcgccttccccgccgcg
ccgtcggcggcgctcgtccccgaccaccccttcgtcgaccaccgcaccggccgcgtccac
cgcacgctgccgtacctcgagggctggagcgtgccgcgctccagcctcgccggcctcgtg
cggagcctcgtcgcggccctgaggatgtgccacccgctgacgacggcctccttcggcttc
gccgccggcgacgccaggaccaccagagccggagcgacgccggtggaggaggagcggcgg
cgcatgcacgcggtgctggtcgacaagctcgccgcgaggctgggcagggacgccgccgcc
ttccgcggcggcgtcgacgaggacatccatgccatgtcctcgatgcaagccgggctccgg
acacggggagacgccatggaccgcgccgtccgcgacctagaagaggagaggacgcggctg
gagcgcgccgtgacggccagcctcgcccaccgcgggaagcttctcgcctggctgcacaag
acgagcccggcgcctgatccgggagtggcactggcaccgcacgcggctgcagggagaggg
gacgcgccgcggtggttggagagcaaggcggcggagctcgccgcggacgacgccattgac
acccttggccgcgcgctggagaacggggagctcagcttccaggagtacatcaagcgcgtg
aagatcctcgccagggagcaatttttccattgctatgcagcgtccaagtcgacctag

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