Setaria viridis (green foxtail): 117847744
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Entry
117847744 CDS
T07951
Name
(RefSeq) PWWP domain-containing protein 1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00270
Cysteine and methionine metabolism
svs01100
Metabolic pathways
svs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
117847744
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117847744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117847744
03032 DNA replication proteins [BR:
svs03032
]
117847744
03036 Chromosome and associated proteins [BR:
svs03036
]
117847744
Enzymes [BR:
svs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
117847744
Transcription factors [BR:
svs03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117847744
DNA replication proteins [BR:
svs03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
117847744
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117847744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
Motif
Other DBs
NCBI-GeneID:
117847744
NCBI-ProteinID:
XP_034584913
LinkDB
All DBs
Position
3:complement(2448669..2455491)
Genome browser
AA seq
964 aa
AA seq
DB search
MSDPAAGGAIVHADGGGSAWANGGPLFGDMVWGKVKSHPWWPGHIYSVDLTDDEEVHRGR
RDGLVLVAFFGDSSYGWFEPQELVPFEDHFAEKAAQGGSSRSSFAAAVAEAVDEVARRSA
LALLCPCREPGAFRPHPGDGRFFLVDVPGFDSDADYHPDQIQAARDRFVPRKALDYLLDA
AVTQQDVAEAAARTVPGMEMAGLFMAYRRTVFAPRDDTYAEAFGVDPEKVLEAEKKAAAD
RAQRARPLKGGPRKTPDQATPMPGRRRGGAGGAAARLMEKIVPGASAMKAKSSKKDQYLL
KRRDPPEPAHRQQPPPLPDAPAPAPPALDDGPPGFRSGDPPTPPLPGGTLTDEEEFMLQR
RAPLVEVPPAAQATEGGAAAAAASAAADAAPKKATKAKKPRKREMEEAADAGPCAAAAGE
PKKKKKKKKLNDLDGAVPNVTDPNGLDLAQVISDIRNLPLAPFHGADRRISDAARSFVLA
FRSKYYKKSYENDPPEESKKSLDKPSAAAAAAADGQPVKKKKLVVRPGAGNDPTRAGVKR
GPSDRQEELAVKKKAKLDKIKTLSSEKKAGGLEQRDSSVASPVAQQQARPKAETGAAKKK
EPAPAPRIRTPSPTALMMKFPLKSTLPSVASLKARFARFGPLDVDGIRVYWKSHMCRVIY
RFKADAEAALRYASGNAMFGQVDTQYHLREVESAGREPAAPEAPPSQQRSELRLMETAAF
RPGSSGNGAPLPMSRAVPARPAVGQQPKSILKKSTDDGTAGAAAREAPRVKFMLDAGDSK
VDPPAPPATGGADSSKATKSVGFAPQPPARTLQPPMRPTQPPLQQPPRAATAAAVTQQLP
PPPPLPYQPRPSDGLLPGSGQQLPYPPRHTEMPLAAFSNSLPPPPYPPRHSEGPSALPGP
PPLPPYPPRSAGFPSQQQQEIPAWKRSKEEFKDEVWRLMTGIAKIVDPLTDKNGFFPYHL
FRAQ
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccccgccgccggcggcgcaatcgtccacgccgacggaggcggcagcgcgtgg
gcgaacggcggccccctcttcggcgacatggtctggggcaaggtgaagtcccacccgtgg
tggccgggccacatctacagtgtcgacctcaccgacgacgaggaggtacaccgcggccgc
cgcgacgggctcgtcctcgtcgcgttcttcggcgactccagctacggctggttcgagccg
caggagctggtccccttcgaggaccacttcgccgagaaggcggcccagggcggcagctcc
cgcagcagcttcgccgccgccgtcgcggaagccgtcgacgaggtcgcccgccgcagcgcg
ctcgcgttgctctgcccgtgccgggaacctggcgcgttccgcccccaccccggcgacggc
agattcttcctggttgacgtcccgggattcgactccgacgccgactaccaccccgaccag
atccaggccgcgcgggatcgattcgtgccgcggaaggcgctggactacctgctggacgcg
gccgtgactcagcaggacgtggccgaagccgccgcgcgcaccgtgccggggatggagatg
gccgggctgttcatggcgtaccgccgcacagtgttcgccccgcgcgacgacacctacgcc
gaggccttcggggtggatccggagaaggtgcttgaagccgagaagaaagcagcggctgat
cgagcacaacgagctcggcctctcaagggtgggcccaggaagacgccggaccaggccacg
ccgatgcccggccgccggaggggcggcgccggcggggccgccgccaggctcatggagaag
atcgtgccgggggcctccgccatgaaggccaagtccagcaagaaggaccagtacctgctc
aagcgccgggacccaccggagcccgcgcaccgccagcagccgccgccgctcccggacgcg
ccggccccggcacctcctgcgctcgacgacggcccgccggggttccgctccggggacccg
cccacgccgccactgcccgggggcacccttaccgacgaggaggagttcatgctgcagcgc
cgcgcgccgctcgtcgaggtcccacccgctgcccaggcgaccgaggggggcgctgccgcc
gcggccgcgtccgccgccgccgacgccgcgcccaagaaggccaccaaggccaagaagccc
cgcaagcgcgagatggaggaagctgctgacgcgggtccctgcgccgccgcggccggcgag
cccaagaagaagaagaaaaagaagaagcttaacgatctggacggcgcggtccccaacgtg
accgaccccaacgggcttgacttggcgcaggtaatatcggacattcggaacctcccgctc
gcccccttccacggcgccgaccgtcgcatctctgacgccgctcgctccttcgtcctcgcg
ttccgctccaagtactacaagaagagctacgagaacgacccgcccgaggagtccaagaag
agcctcgacaaacccagcgccgccgccgcagcagccgccgacggccagccagtgaagaag
aagaagctggtcgtgaggcctggcgccggcaatgaccccaccagagccggcgtgaagcgt
gggccgtcggaccggcaggaggagctggccgtgaagaagaaagccaagctcgacaagatc
aagacattgtccagcgagaagaaggctggaggcctggagcagagagacagctctgtcgcg
tccccggttgcccagcagcaggcacggcccaaggccgagacgggtgccgccaagaagaag
gagccggcgccggctccgaggatcaggaccccgtcaccgacggcgctgatgatgaagttc
ccgctgaagagcacgctgccgtcggtggcgtcgctcaaggcgcggttcgcgcgcttcggg
cccctcgacgtcgacggcatccgcgtgtactggaagtcccacatgtgccgcgtcatctac
aggttcaaggccgacgccgaggccgctctcaggtacgccagcggcaacgccatgttcggg
caggtggacacccagtaccacctccgtgaggtcgagtcggcgggccgggagccagcggcg
ccagaagcgccaccctcgcagcagcgctccgagctgcggctcatggagaccgctgcgttc
aggcccggtagctccggcaacggcgctcccctgcccatgtccagggccgtgccggcgcgc
ccggccgtgggacagcagcccaagtcgatcctgaagaagagcacggatgatggcacggcc
ggcgccgccgccagggaggcccctcgggtcaagttcatgctggacgctggggacagcaag
gtcgatccgccggcaccgccggccaccggcggcgcggacagcagcaaggccaccaagtcg
gtcggtttcgccccgcagccacccgcgcgcaccctgcagccgcctatgcgccccacgcaa
ccgcccttgcagcagcctccccgcgccgccaccgccgccgccgtcacccagcagctcccg
ccgccgccgccactgccataccagcctcgccccagcgacgggctgctccccggctcaggc
cagcagctaccatacccgcctcgccacaccgaaatgccattggcagctttctccaacagc
ctaccgccaccgccgtacccgccccgccacagtgagggcccgtccgccctccctgggccc
ccgccgctgccaccgtacccgcctcgctccgccggtttccccagccagcagcagcaggag
atacccgcgtggaagaggagcaaggaggagttcaaggacgaggtgtggaggctcatgacg
gggatcgccaagatcgtggacccgctcaccgacaagaacggcttcttcccctaccacctc
ttccgagcgcagtga
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