Setaria viridis (green foxtail): 117847754
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Entry
117847754 CDS
T07951
Name
(RefSeq) EH domain-containing protein 1
KO
K12483
EH domain-containing protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117847754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117847754
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117847754
Membrane trafficking [BR:
svs04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117847754
Exosome [BR:
svs04147
]
Exosomal proteins
Proteins found in most exosomes
117847754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EHD_N
EH
EF-hand_7
MMR_HSR1
EF-hand_1
GTP_EFTU
EF-hand_6
AAA_16
TsaE
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
117847754
NCBI-ProteinID:
XP_034584922
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Position
3:2065654..2069987
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AA seq
629 aa
AA seq
DB search
MKPMVPGQGATCQRPARPMGNAAFAAAASHINPREEAPRARLPWHSLILLQARVACLASP
GPPPSPRLFSPLRGAPAEREVNEPGREMGPDSSPKKWNLKEQRSTYLQWFSLADEDGDGR
LTGNDALKFFAMSNLSKPELKQVWAIADSKRQGYLGFYEFMTAMQLVSLAQAGNEISPDT
ISSADLERLQLPTMEGLAKKLKKNSGGKGESAIVACHPSESPIPASWFNSKSGKKIPLKS
VTSIIDGLKKSYIERLRPLEKTYQFHDFVSPLLTSSDFDAKPMVMLLGQYSTGKTTFIKH
LLKTSYPGAHIGPEPTTDRFVVITSGPDERCIPGNTIAVQADMPYSGLSSFGTAFLSKFE
CSQMPHPLLEHVTFVDTPGVLSGEKQRTQRSYDFTGVTSWFAAKCDLILLLFDPHKLDIS
DEFKRVIGSLRGHDDKIRIVLNKADQVDAQQLMRVYGALLWSLGKVLNTPEVMRVYIGSF
NDKPIRETAAGPLGMELFQKEQDDLLSDLNDIPKKACDRRINEFVKRARAAKVHAHIVSH
LKKEMPALMGKAKAQQKLLDSLDEQFAKVQKELHLPPGDFPSVEEYRELLSAYNFDKFEK
LRPKMVQGVDDMLAYDIPELLKKFRNPYD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatggtgcctggtcaaggcgccacttgccagcgcccggcgcggccgatgggc
aacgccgcgtttgccgcggcggcgagccacattaacccgcgggaagaggctccccgcgcg
cgcctgccgtggcattctctgattctccttcaggcacgagttgcctgcctggcctccccg
gggcctcctccctctcctcgtctcttctctcctctccgaggggctccggcagagagggag
gtgaacgagccggggagagagatgggacccgactcgtcgcccaagaaatggaacctcaag
gagcagcgcagcacctacctccagtggttctccctcgccgacgaagacggggatgggcgc
ctgacggggaacgatgcgctcaagttcttcgccatgtccaatctctctaagcccgagctg
aagcaggtttgggcaatcgctgattccaaacgtcagggatatcttggattctacgagttc
atgaccgctatgcagctggtttctctcgcacaagcagggaacgagatcagtccagacacc
atttcaagtgcagatttggagaggttgcagcttcccacaatggaaggtctggctaaaaaa
ctaaaaaagaattctgggggcaagggcgagtctgctattgtagcatgtcatccatcagaa
tcacctataccagccagctggtttaactccaagtcaggaaagaagattcctttaaaatca
gttacttcaatcattgacgggctaaagaaatcatacattgagaggttgaggcctttggaa
aaaacttatcagttccatgactttgtgtctcccttgctgactagcagtgattttgatgcg
aagccaatggtcatgctgctgggtcaatactccaccggaaaaacaaccttcataaagcat
ttactaaagacaagttatccaggcgctcatattggaccagagcctacaacagacagattt
gttgtcatcacttctggaccagatgaaagatgcattcctggaaacacaattgcggtccaa
gctgacatgccatacagtggcttgtcatccttcggaacggcatttttatcgaagtttgaa
tgttcccagatgccgcatccattactagagcatgtaaccttcgtggatactcctggagtt
ttatcaggggaaaagcagcgaacacagcgcagctatgatttcactggagttacatcatgg
tttgccgccaagtgtgatcttattcttctcctatttgatccacataagcttgacatcagc
gatgagttcaagcgtgtgattgggtcactccgtgggcatgacgacaaaatacgcatagtt
ctcaacaaggcagaccaagttgatgcacaacagctaatgagagtgtatggagcactattg
tggtctctcgggaaagtcctgaacacaccagaagttatgcgtgtctacataggttcattc
aatgacaagccgatcagggagacagctgctggcccactgggcatggagctattccagaaa
gaacaggatgacttgctctccgacctgaacgatatccctaagaaagcttgtgatcgtcgg
atcaacgagttcgtgaagcgtgcgagggctgccaaagttcacgcgcacatagtcagccat
ctgaagaaagaaatgcctgcactgatgggcaaggccaaggctcagcagaagctgctcgac
agcctcgatgaacagtttgccaaggtccagaaggagctgcacttgccgccaggggatttc
cccagcgtggaggagtacagggagcttctaagcgcctacaacttcgacaagttcgagaag
ctgaggccaaagatggtccagggcgtcgacgacatgctggcctacgacattccagagctc
ctgaagaagttcaggaacccctacgactga
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