Setaria viridis (green foxtail): 117847921
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Entry
117847921 CDS
T07951
Name
(RefSeq) leucine--tRNA ligase, cytoplasmic
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117847921
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117847921
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117847921
03029 Mitochondrial biogenesis [BR:
svs03029
]
117847921
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
117847921
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
117847921
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117847921
Prokaryotic type
117847921
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
117847921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
RBD_LARS1
Motif
Other DBs
NCBI-GeneID:
117847921
NCBI-ProteinID:
XP_034585116
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Position
3:2290867..2295670
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AA seq
1231 aa
AA seq
DB search
MLTPMGRLYNNKKVALPLRVGFQMAGESGPWPDSWLGKAPWIGLSKRAACPCPNHYQKRK
KKSCLNPSPPFIPYTRLPPPLPSPLPPPLHSAEIGGLSSPLPHPASPLSLAAATWRAAAL
LGLRQALCRRRAPTRKMSSNPDGGKSYARRDLLIAIQSEAQKLWDEKRVFEAEPGNGRPG
PGEKFFGNFPYPYMNGLLHLGHAFSLSKLEFGAAYHRLRGSNVLLPFGFHCTGMPIKASA
DKLAREIQQYGNPPVFPAVEDEVSSEVADSQADQAVAVAPDKFKSKKAKAAAKTGVQKFQ
WEIMRGFGLSDEEIAKFQDPYHWLTYFPPLAKEDLKAFGLGCDWRRSFITTDMNPFYDAF
VRWQMRKLKKMGKVVKDMRYTIYSPLDGQPCADHDRASGEGVQPQEYVLIKMEVIPPFPP
QLKALEGKKVYLAAATLRPETMYGQTNCWVLPDGKYGAFEINDTDVFILTARSALNLAYQ
NLSRVPQKPTCLAEISGNDLIGLPLKSPLAFNEIIYALPMMTILTDKGTGIVTSVPSDSP
DDFMALQDLVTKPALRAKFAVKDEWVLPFKVVPIINIPEFGDKSAEKVCLDLKIKSQNDK
EKLAEAKRMTYLKGFTDGTMIVGEFKGRKVQDAKPLIKNKLLEEGAAVLYSEPEKKVMSR
SGDECVVALTDQWYITYGEAEWKQMAEKCLENMNTFSAETRNGFEHTLGWLNQWACSRSF
GLGTRIPWDEQFLVESLSDSTLYMAYYTVAHLLQNGNLYGKEISAIRPEQMTDDIWEYVF
CNGPTPKSDIPPTLLSKMKQEFEYWYPFDIRVSGKDLIQNHLTFCIYNHTAILPEHHWPR
GFRCNGHLMLNSEKMSKSTGNFRTLKEAIQEFSSDATRFALADAGDGMDDANFVFETANA
AILRLTKEIAWMEEVVAAESSLRAGPPSSYADHVFANEINIAVKETEKSYNAFMFRDALK
SGFYDLQLARDEYRLSCGAAGMNRDLLWQFMDVQTRLITPICPHYAEHVWQKILKKEGFA
IKAGWPVADTPNPTLRIANKYLQDSIVLMRKLLQKQESGSKKPKKGAASAPPPSENKMSI
GLIYVNEHYYGWKEQCLKVLQSKFDSQARSFSPDQEIIEALKNCSIGQEANFKQVQKLCM
PFIRFKKDEAREVGPQALELKLPFGEMDVLQENLELIRRQLGLEHVEVLSASDEAARAKA
GKYASLLNQNPPSPGEPVAIFMSKQEFEAQN
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaccaatgggcagattgtataataacaaaaaagtcgctctgcccctccgcgtg
ggcttccaaatggcaggagaatctggcccgtggccagattcctggctcgggaaagccccg
tggattgggctatccaaacgagccgcttgcccttgccccaaccattatcagaaaaggaaa
aaaaaaagttgcctcaaccctagccccccttttatcccctatacccggctccctccgccc
cttccctctccattgccgccgccgctccactccgccgagatcggcggcctctcctctccc
ctcccgcacccggcctctcccctctccctggcggcggcgacttggcgagcggcggcgcta
cttggtcttcgccaggccctttgccgacgacgagcacccaccaggaaaatgtcgtctaat
cctgatggaggcaagagctatgctcgcagagatctcttgatcgcaattcaatcagaggct
caaaagctgtgggatgagaaacgggtttttgaggctgaaccaggcaatggtcgtcctggg
cctggcgaaaaattctttggcaactttccgtatccttacatgaacggattgttgcatttg
ggccatgccttctcgttgtccaagcttgagttcggtgctgcgtaccacagactgcggggc
tccaatgtccttttgccgtttggtttccattgtactggaatgcctatcaaggcctcagca
gataagcttgcaagggaaattcagcaatatggtaatcctccagtgtttcctgcagtagag
gatgaagtcagctcagaagtagcagatagccaggctgaccaggctgttgctgttgcccca
gataaatttaagagcaagaaagctaaggctgctgcaaagactggtgtgcagaagttccaa
tgggagatcatgaggggttttggcctgtcagatgaagaaattgctaaattccaggatcca
tatcactggttgacatacttccctccattggcgaaggaggaccttaaggcttttggtcta
ggatgtgattggagacggtcattcataacgaccgacatgaacccgttctatgatgctttt
gtccggtggcagatgagaaagctgaagaaaatgggcaaggttgttaaagatatgaggtat
acaatctactctccattggatggccaaccttgtgctgatcatgatcgagcatcaggtgaa
ggtgtgcagccacaggaatatgtgttgattaaaatggaggtgatcccacctttcccacct
cagttgaaggcattggaggggaagaaagtttacttggctgcagctacactgagacctgag
acgatgtatgggcagacaaattgttgggtactgcctgatggaaagtatggggcctttgag
atcaatgatactgatgtcttcattctgactgcaaggtctgctcttaatcttgcatatcaa
aatctatcaagggtcccacagaagccaacatgcttggctgagatatctggaaatgatctg
attggtttgccgttgaagtctcctcttgcctttaatgaaatcatatatgcgcttcctatg
atgaccatcctaacagataaagggactggcattgtgactagtgttccaagtgattctcca
gatgatttcatggcgctgcaagatttagtcacaaaaccagctctgagggcgaagtttgct
gtcaaagatgagtgggttcttccattcaaggttgttccaataatcaatatccctgaattt
ggagacaagtcagctgagaaggtgtgcttagatctaaagattaagagccagaatgacaag
gagaagcttgctgaagcaaagcggatgacatatttgaaaggattcactgatggaactatg
attgtaggagagttcaagggcagaaaagttcaagatgcgaagccattgataaagaacaag
cttctggaagaaggtgctgcagtgttgtacagtgagcctgagaagaaggtaatgtcgaga
tctggtgacgagtgtgtagttgctctcacggaccagtggtatataacatatggtgaggct
gaatggaagcagatggcagagaaatgtttggaaaatatgaataccttctcagctgagacc
cgcaatggctttgagcacactttgggctggctgaaccagtgggcctgctcacgctcgttt
ggtctagggactcgcatcccatgggacgagcagttccttgtggaatctctttcagattcg
accctatatatggcttattacaccgtcgcgcatcttttgcaaaatggcaatctgtatggc
aaagagatatctgctatcaggccagaacaaatgacggatgatatctgggagtatgtgttc
tgcaatggtccaacaccaaaaagtgacatccctcctacccttttgagcaaaatgaagcag
gaatttgagtactggtatccctttgatatccgggtttctggtaaggatcttatccagaac
cacctgacgttctgcatttacaaccatacagcaattctaccagaacaccattggccccgt
ggcttccgttgcaatgggcatcttatgctcaattctgagaagatgtccaagtcgacaggg
aatttccgtactcttaaggaggccattcaagaattctcatctgatgccactaggtttgca
cttgctgatgctggtgatggtatggatgatgcaaactttgtctttgaaactgcaaatgct
gctatcttgaggcttacaaaggaaattgcatggatggaagaggtggtagctgctgaatct
tctctgcgagctggccctccatctagttatgctgaccatgtttttgccaatgagataaac
attgctgtcaaggaaactgagaagagctacaatgccttcatgttcagagatgcactgaag
tctgggttctatgacctgcagctggctagagatgaatacagactctcttgcggagcggca
ggcatgaaccgtgatttactgtggcaatttatggacgtccagacgaggcttatcacccct
atctgtccacattacgcagagcatgtgtggcaaaagatcctgaagaaagaaggctttgcg
attaaagctgggtggccagtggcagacaccccgaaccccactctaagaatcgcaaacaag
tacctgcaagattctatagttttaatgaggaagctgcttcagaagcaagaatctggttcg
aagaaacccaagaagggagctgcatctgctcctcctccgtcagagaacaagatgagcatt
ggtcttatatatgtgaacgaacactactacggctggaaagagcaatgcttgaaggtgctc
cagtctaaattcgacagccaagcacgttccttttcaccagaccaggagatcatagaagct
ttgaagaactgttccatcggacaggaagcaaacttcaaacaagttcagaagctgtgcatg
cccttcatcaggttcaagaaagatgaggcgagggaggttggccctcaggctttggagttg
aagcttccttttggtgaaatggacgtgctgcaggagaacctggagctgatcagaaggcag
ttgggcctcgagcatgtagaggtgttgtcggcatctgatgaagctgcccgtgctaaagct
ggcaagtatgcgtctctactgaaccagaacccgccgtctcctggcgagccagttgcaatc
ttcatgagcaagcaggaattcgaagcccaaaactga
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