Setaria viridis (green foxtail): 117847946
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Entry
117847946 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117847946
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
117847946
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GFIT
Motif
Pfam:
TPR_AP5Z1_C
SPG48
DUF4172
Motif
Other DBs
NCBI-GeneID:
117847946
NCBI-ProteinID:
XP_034585141
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Position
3:complement(1126410..1133465)
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AA seq
580 aa
AA seq
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MASPELRGSDGSSYDFHLRSLSAASRDSAAAADPASDPNLLQSVRRVCEMCREAKEARDE
MVARAFPVMSKLFQRCATAPTQAVASTGSLLLTILQFVLDFGEAVLHDADDSLKTFFRSC
LSREFADPIVAERTLEFLIANKTKILGSFPTLIPQFYPLLLKLIASNGERLEKKFLEVLP
LMMSAGSFLPLFLSLMDLPMLVVALEKVERSSGTLIGSSIATIQKSAAPEMLLALMDEAY
TGSAIEDSSGISGSDDSSPLDLADPMFLDLLKDENDGIAAKHWISPTISSTLQAAVNSTQ
SDRLKQSLEMAPRFLSLYFATALRDVNDSLLCALVPVVMSRYAAMFPDKVFSFEVRKRLS
DFILAAFQRSPDIIAILKKPITDRLGEAYDDPGKTELALHLCWAIGEHGAGGINRKDVAR
ELFENLELLLYENLATSRLGLSQEPGFDSMGASSRKSSQARLLCFVVTAIAKLATCHSEL
LPRARVSLAKVARTRTSDRRVWQRACDYLGLMNEPAICLSVLGPSTAQGNGPGIVDWSEG
GTKMVAHVPFYLLAEQKGPPFHDFSFADLLPRQNEEKLPS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccggagctccgcggcagcgacggcagcagctacgatttccacctccgctcg
ctctccgcagcctcacgggactccgctgcagccgctgaccccgcctccgaccccaacctc
ctccaatccgtgaggagggtgtgcgagatgtgccgggaggcgaaggaggcgagggacgag
atggtggcgcgggcgttcccggtgatgagcaagctgtttcagcgatgcgccactgctccg
acgcaggccgtggcctccaccggctcgctgcttcttaccattctgcaattcgtcctggac
tttggggaggcagtcttgcatgatgctgatgatagtttgaaaaccttcttccgctcttgc
ttaagtagggagttcgcggatcctattgttgcagagcgcacacttgaattccttatagca
aacaagacaaagatccttggttcttttcccaccttgattccacagttttatccgctgctg
ttgaagttaattgcatcaaatggtgagagactggaaaagaagtttttggaagtacttcca
ttaatgatgtcagcaggatcttttcttccgctcttcctgtcccttatggatctgccaatg
ttggtggtggcactggagaaggtggaaagaagttctggaactcttattggtagtagtata
gctacaattcagaagagcgctgctcctgagatgcttcttgcactgatggatgaggcatac
actggttctgcaatagaagattctagtggtatttcaggttctgatgatagtagccctcta
gacctcgctgacccgatgttcctagatcttctaaaagatgagaatgatggcattgccgca
aaacattggatatcccctacaatatcttcgacactacaagcagcagttaacagcacacaa
tcagacagattaaaacagtcgctggaaatggcacctcgctttctttctttgtattttgca
actgcattgcgggatgttaacgactcgctgttgtgtgctcttgttccagtggttatgtca
agatatgctgcaatgttccctgacaaggttttctcattcgaggttaggaaaagactgtcg
gatttcatattggctgctttccagcggtctcctgacatcattgcgatactaaagaagcct
attactgacagacttggtgaggcttatgatgatcctggaaagacagaattagcattgcac
ttgtgctgggccattggtgagcatggagctggagggataaatcgcaaagatgtagctcgt
gaactatttgaaaatttggaattgttactgtatgaaaacctggcaactagtcgtttggga
ttaagccaggaaccgggatttgattcgatgggtgcgtcttctagaaaatcatcccaagct
aggctcctctgctttgtggtgacggcaattgcaaaactagcaacatgccacagtgagttg
cttccgagagcacgcgtatcattggctaaggttgctcgtacccgaacctcagacaggaga
gtctggcaacgtgcctgtgactatttggggctcatgaatgaaccggccatctgtttatct
gtactgggaccgtccactgcccaaggaaatggtcctggtattgttgactggagtgaagga
ggaacaaagatggtagctcatgttcccttttaccttttagctgagcaaaaaggtccacca
tttcatgatttttcatttgcggacctcctcccaagacagaatgaagagaaattaccttca
tga
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