Setaria viridis (green foxtail): 117848022
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Entry
117848022 CDS
T07951
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117848022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117848022
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
117848022
Ubiquitin system [BR:
svs04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
117848022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
Myosin_N
Motif
Other DBs
NCBI-GeneID:
117848022
NCBI-ProteinID:
XP_072148543
LinkDB
All DBs
Position
3:41821961..41826056
Genome browser
AA seq
983 aa
AA seq
DB search
MPHVGSQHDTRRMLLHVIRRVRLELDLVSENISACSCRPSRKHPNPLLKITIISLCVRNI
QPRGREPADPIQSITPTMQDKAGQFICWLDLVRLNSPAAGSNRDRGLVLRGMPGPKVVVQ
CLDGTEVTVNARNVRVADRSYFCPGMVVASASDRGGQLGVVTGAAVELDLVRLDGEDAAA
ALVARGVSPAELRRVSEFCLGDYVVSGPWLGRVFEVSLDVDVLFDDGTVCRVTTADGKLW
PVGEGSSKRYTNNVFYPGQRVGGRSSVFKAARWLKGYWKPSDGEGTVSKVETASVLVYWV
ASSQLGAERSVVQASSTPAHQQSPRDLTFFRAGDDVLARFWGVGDRCFFRAPCRRRVLPA
GDVGANRNRLRRLGAKRTPRRESWSHAGFERPLSVASTRTTLDVLWQDGTRQCQAPSVSL
VPTMPQNTHHLFPGQRVVSRTSSDDGDVARSGVVRSLNFTDQTVRVSWQKAAAEHADDET
LSSTYDLGRDFDSNVFYGDVVVRRRPTDSSIGVAGDICGSTEEPVLTRCRKKEPTRAHDL
SWVGHIVDFCDAHHVQVKWGDGNMSKVCNTWYRFQVSFHEITVVKEQSFGEFLQEIGEWV
SEDGGMSNDAIDHEAQVTAAAVVSIPPHTNFNSPRDRVNGWTVPGASTSELTARGNNNVS
APVSGGDGDAKETSTAVAGINGGGGGEGKQAEADATGDDKSFSFPQFDIVQSPSDHHYLD
NMEQGTGGGKKWMKRVQKEWNILENNLPDTIFMRAYEDRMDLLRAVMVGASGTPYHDGLF
FFDLQLPPSYPAAPPLVCYRSFGLRVNPNLYPSGTVCLSLLNTFGGHGAELWSPEASTVL
QVVVSIQGLVLNAQPYYNEAGYADLVGTPQGRRNELPYSENTYLLTLQTMLHLLRRPPAG
FEEFVRDHFHRRGQHVLRACEAYLDGCLVGTLDGEGSGARRPCSAGFRLALANVVPRLVE
AFTAIDADGCKEFDRIRVPTVCT
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgtgggctcacaacacgacacaaggcgcatgctcctccatgtgattcgtcgt
gtacgactcgaactagatctcgtctccgaaaacatctcggcatgctcgtgcagaccaagt
agaaaacacccaaaccctctgctaaagattacgattattagcctttgcgtacggaacata
caacctcgagggagagaacctgctgatccaattcaatcaatcacgccgacaatgcaggac
aaggctgggcagttcatctgctggctagacttggtcaggctcaactcgccggcggcaggc
tccaaccgggaccgcgggctggttctcaggggcatgcccgggccgaaggtcgtcgtgcag
tgcctcgacggcaccgaggtgacggtgaatgctcgcaacgtccgtgtcgcggaccggagc
tacttctgcccgggcatggtcgtcgcgtcggcgtcagaccgtggcggccagctcggggtc
gtcacgggcgccgccgtggaactggatctggtccggctagacggtgaggacgcggcggcg
gcgttggtcgcgaggggcgtgtccccagcggagctgcgccgcgtcagtgagttctgccta
ggcgactacgtcgtgtcaggaccgtggctgggccgggtcttcgaggtgtccctcgacgtc
gacgtgctcttcgacgacggcaccgtctgcagggtcacaacagcggacggcaagctgtgg
cccgtcggcgagggctcttcaaaacgctacaccaacaacgtcttctatccggggcagcgc
gtcggcggccgctcgtccgtcttcaaggccgcccggtggctcaagggctactggaagccc
agcgatggcgagggcaccgtgtccaaggtggaaaccgccagcgtgctcgtctactgggtc
gcgtcgtcgcagctgggcgccgagaggtccgtcgtccaggcgtcgtccacgccggcgcac
cagcagagccctcgcgatctgacattcttccgcgctggcgacgacgtcttggcaaggttc
tggggcgtgggcgaccgctgcttcttccgcgctccttgccgccgccgcgtactccctgcc
ggcgatgtcggtgccaaccggaatcggctgcggcggctgggggcgaagcggacgccgcga
cgagaaagctggagccacgcagggttcgagcggccgttgtccgtcgccagcacgcgcacg
acgctcgacgtgctgtggcaggacgggacgcggcagtgccaggcgccgtcggtgtcgctc
gttcccacgatgccacagaacacccaccacttgttcccgggccagcgcgtcgttagcagg
acatcgtcggacgacggcgacgtcgcgcgttctggtgtcgtcagaagcctcaacttcacg
gaccagaccgtgcgcgtgtcgtggcaaaaggcggcggctgaacacgccgatgacgagaca
ctgagcagcacgtacgatctcggcagggatttcgacagcaatgtcttctatggagatgtt
gtcgtccgcaggcgtccaacagactcctcaattggggtcgccggcgacatttgtggaagc
acggaagagccagtgctgacacggtgccgaaagaaggagcccactagagctcatgatctt
tcatgggtcggacacatagttgatttttgtgatgcacaccatgtccaagtcaagtggggt
gacggcaacatgtccaaagtatgcaacacatggtaccgatttcaggtgtctttccatgag
ataactgtcgtcaaagagcaaagttttggtgagttccttcaggaaataggcgagtgggtg
tctgaagatggaggcatgagcaacgacgctattgatcacgaagcacaagtgactgccgct
gccgttgtaagtatccctccgcacacaaatttcaattccccaagagatcgggtaaatggt
tggacggtgccgggagcgtcaacctcggagcttacggccagagggaacaacaatgtatcc
gcacccgtgtccggtggtgatggtgatgccaaggagacctccactgctgtggcaggcatc
aatggaggaggtggtggtgaggggaagcaggcagaggcagatgccaccggcgatgacaag
tcatttagcttcccacaatttgatatcgtgcagagcccttcagatcaccattaccttgat
aacatggagcagggcactggtggggggaagaagtggatgaagagggtgcaaaaggaatgg
aatattcttgagaataacttgccagacaccatcttcatgcgggcgtacgaggaccgcatg
gacctcctgcgagcggtgatggtcggagctagcgggacgccgtaccatgacggcctcttc
tttttcgatctgcagctaccgccgtcgtaccctgccgcgccaccgctggtgtgctaccga
tcgttcggcctacgtgtgaaccccaacctctacccctccggcacggtgtgcctgagcctg
ctcaacaccttcggtggccacggagccgagctgtggtccccggaggcttcgaccgtcctc
caggtcgtcgtctccatccagggcctcgtgctcaacgcccaaccatactacaacgaggcg
ggctacgccgacctggtaggaacgccgcagggtcgccggaacgagctcccgtacagcgag
aacacctacctgctcaccctgcagaccatgctccacctcctgcgccggccgccggcgggc
ttcgaggagttcgtcagggaccacttccaccggcgagggcagcacgtgctccgagcgtgc
gaggcatacctagatggctgcctcgtgggcacgctcgatggcgaggggagcggggcgcgg
cgcccgtgctcggcggggttcaggctcgccctcgccaacgtggtgccccggcttgttgag
gcgttcaccgcgatcgacgctgatggatgcaaggagttcgatcggatacgggtgccaaca
gtatgcacttaa
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