Setaria viridis (green foxtail): 117848183
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Entry
117848183 CDS
T07951
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117848183
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
svs00535
]
117848183
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117848183
Meiosis-specific proteins
Cohesin complex and associated proteins
117848183
Proteoglycans [BR:
svs00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117848183
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Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
APG6_N
DUF7504
AAA_29
Motif
Other DBs
NCBI-GeneID:
117848183
NCBI-ProteinID:
XP_072148967
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Position
3:43612684..43624344
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AA seq
1204 aa
AA seq
DB search
MYIKKVIIEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIVFDNTDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
DTANKRKQIDQVVRYLEERLRELDEEKEELKKYQQLDKQRRSLEYTILDHELNDARNELA
SMDDNRRKISESMSHADNEVVDVREMIKSFDKEIKVSTKGINDTKAQKEGVEKRRTEALK
VVAQIELDLRDIKDRIVNEKRAKDEAARDLHSVRRESEKSKSELAEISKVHQAKLKEEEE
ISKSIMDREKRLSILYQKQGRATQFANKAARDNWLQKEIEDLEPVLLSNRKQEGLLQEEI
QKLKDEISNLTTYIESRKSESSKLEATLAKRHNDYNDLRKQRDVLQEERKSFWTEETDVG
AEIQRLRDELTKAQKSLDHATPGDIRRGLNSVSRIIRDHGISGVFGPVLELVDCEEKFFT
AVEVTAANSLFHVVVENDDISTRIIQILTREKGGRVTFIPLNRVKVPDLNCPQSPDFVPL
LKKLKYRADHRRAFEQVFGRTVICRDLETATKVARGNSLDCITLDGDQVSKKGGMTGGFY
DSRRSKLKFVKIIRDSKIAIEKKTAHLENVGNKLKDIDKKITDLVTRQQQMDAERDHAKS
ELEQIKVDITSAMKQKGSLEKALGKKEKSLENIRNQIEQIQSSIAMKNDEMGTELIDQLT
SEERDLLSRLNPEITELKEKFLLCKNSRIEIETRKEELETNLSTNLIRRQKELEAIISSA
DSRTLPLEAESKEQELKSSKRNLDELTSLLKANVDAINNFTRKMDDLKRKRDDLKTREAI
LEQTVQDGAKDLEQLMNSRSTHLAKQEECMKKIRDLGSLPADAFEAYKRKNKKQLQKMLY
ECNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDQKIMELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAGDDDNDEDGPRDPDPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADVVDTQFIATTFRPEIAKVADKIYGVTHKNRVSYINVVSKEQALDFIEHDQT
HNAS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagaaggttataattgaagggtttaagagctacagggaggagatctcaaca
gaacccttcagccccaaagttaacgtagtcgttggtgcaaatggatccggcaaatcaaat
ttctttcatgctatacgatttgtcctgagtgacatgtttcagaatcttcggagtgaagat
aggggtgcccttctccatgaaggtgctggacactcggttgtatctgcttttgttgagata
gtgtttgataatacagacaaccgtattccagttgataaagaagaggtacgcttgcgcagg
actgttgcttcaaagaaggatgaatactacttggatgggaagcatgtcagtaaaactgaa
gtcatgaatcttctagagagtgctggtttctctcgttctaatccatactatgttgtccag
caaggaaagattgcatcccttaccctgatgaaagattctgaacgactggatcttctcaaa
gagatcggtggtacacgcgtttacgaggatagacggcgtgagagcttgaaaataatgcaa
gatacagctaacaaaaggaagcagattgatcaagttgtccgctacttggaagaaagacta
agagaacttgatgaagagaaagaagaactgaagaagtaccagcagctggacaaacagaga
agatcactcgagtatactatattggaccatgaactaaatgatgcaaggaatgaattagct
tcaatggatgataaccgaagaaaaatttccgaaagtatgtcccatgcggataatgaagtg
gtggatgtacgtgagatgatcaagagttttgataaagaaataaaagtctcaactaaaggg
ataaatgataccaaggcgcaaaaggaaggtgttgagaagaggcgtactgaagcactgaag
gtagttgctcagattgaacttgatttgagagatataaaagacaggattgtgaatgagaag
agagcaaaggatgaagcagcgagggatttgcatagtgtgaggagggagagtgaaaagtca
aagtctgaattggctgaaattagtaaggtgcatcaggccaaattaaaggaagaggaggag
atatcaaagagcattatggatcgtgagaagcggctaagcatattgtaccaaaagcagggg
agggcaacccaattcgcaaacaaagctgccagggataattggcttcaaaaggaaattgaa
gatcttgagcctgtacttttgtcaaatagaaagcaggaaggtttacttcaagaagaaatt
cagaagcttaaagatgaaattagtaatttgactacctacattgagtctcggaaaagcgaa
tcaagcaagttagaggccacacttgcaaaaagacataatgattacaatgatttgaggaag
cagagagatgtgcttcaggaagaaaggaagtcattttggacggaggaaactgatgtggga
gctgaaattcaaaggctaagagacgaacttacaaaggcacagaagagcttggaccatgca
acgcctggggatatcaggagaggcctgaattctgttagcagaatcattagggaccatggt
atttctggagtttttggtcctgtattagaactggttgattgtgaagagaagttctttaca
gctgttgaggtcactgctgcaaatagcttgttccatgtggttgttgagaatgatgacata
tcaacaaggatcattcaaatattgactcgagaaaaaggtggaagggtgacatttatacca
ttaaacagagtgaaagttccagacctaaattgtccacaaagtcctgattttgttccgttg
ttaaaaaaattgaaatatcgtgcggatcatcgtcgtgctttcgaacaggtttttggcaga
acagtaatatgtcgagacctggaaactgcgactaaagttgcacgtggcaatagtctagat
tgcattacactcgatggtgatcaagtgtcaaaaaaaggtggtatgacaggaggtttctat
gactctagacggtcaaagctgaagttcgtgaaaataataagggatagtaagatcgcaatc
gagaaaaagacggcgcatctagagaatgtcggaaacaagctaaaagatatagataagaaa
attacagatttagttaccagacagcaacaaatggatgctgaacgtgatcatgccaagtcg
gagttggagcaaattaaggttgacatcaccagtgcaatgaagcaaaaggggtcacttgag
aaagcccttggcaagaaggaaaaatcacttgaaaacatccgcaaccaaattgagcaaatc
caatctagcattgcaatgaagaatgacgaaatgggcacagaacttattgatcagctaaca
tcagaggaaagagatctcctttcacgattgaatcccgaaattactgaattaaaggagaag
tttctattgtgtaaaaacagtcggattgagattgaaacaagaaaggaagaattggagacc
aatttatcaacaaatctgatcaggcgtcagaaagagctagaagcaataatttcatctgcc
gattctagaaccttgcctctggaagctgagtcgaaagagcaagaattgaaaagttctaag
agaaatcttgatgagttaacttcgttattgaaggctaatgttgatgccataaataacttc
accagaaagatggatgatctgaaaagaaaaagggatgatctgaagactcgtgaagctatt
ctggagcagactgtacaagatggtgccaaagacttggaacagttaatgaacagcaggagc
actcatctagccaagcaagaagagtgcatgaagaagatccgagacttgggctcattgcct
gctgatgcttttgaagcgtacaaaaggaaaaacaagaaacagctgcagaagatgctttat
gagtgcaacgagcagttgaagcagtttagtcacgtcaaccaaaaggctcttgaccagtat
gtcaacttcacagaacaacgggaacaactgcagagaaggcgagctgagctggatgctggt
gatcagaaaattatggaactaatatcagttttagaccaaaggaaggatgaatcgattgag
cgcacatttaaaggggttgcaaggcacttccgtgaagtgttctctgagttagtgcaaggt
ggtcatggatatttggttatgatgaagaaaaaggatggggatgcaggtgatgatgataat
gatgaggatggacctcgtgacccagatcctgaagggagaatagagaagtatatcggtgtg
aaagtcaaggtttccttcactggcaagggagaaactcagtctatgaaacaattgtcaggg
ggccagaagacagtggtggcgttgacactgatttttgctatacaacgatgtgatccagca
ccattttatctgttcgatgagattgatgctgctctggatccacagtaccgaacagccgtc
gggaatatgatccgccgtctagctgacgtggttgacacccagttcattgcaaccacattc
cgaccagagattgccaaagttgctgataagatatatggtgtgacacacaagaacagggtg
agctacattaatgtggtgtcgaaggagcaggcgctggacttcattgagcatgatcagact
cacaatgccagctga
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