KEGG   Setaria viridis (green foxtail): 117848199
Entry
117848199         CDS       T07951                                 
Name
(RefSeq) coatomer subunit beta'-2
  KO
K17302  coatomer subunit beta'
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117848199
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svs04147]
    117848199
Membrane trafficking [BR:svs04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    117848199
Exosome [BR:svs04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117848199
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 PEP5_VPS11_N WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N TPR_12 HEAT_GCN1 TPR_8 WD_LRWD1 Clathrin
Other DBs
NCBI-GeneID: 117848199
NCBI-ProteinID: XP_034585427
LinkDB
Position
1:3758735..3768569
AA seq 921 aa
MPLRLDIKRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTDLPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIITGSEDGTVRMWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REVPVASMDSSGKIIWAKHNEIQTVNIKSVGADNEIADGDRLPLAVKELGSCDLYPQTLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTDGEYAVRESTSRIKIYSKNFQ
EKKSIRPSFSAERIFGGVLLAMCTNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSSHLDGGGSVGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTLFHLDRPMYLLGYLANQSRVYLIDKQFNVVGYTLLLSLIEYKTLVM
RGDFDRANDVLSSIPKEQYDSVARFLESRGMLEEALEIATDTNYRFDLAVQLGRLEIAKA
IATEVQSESKWKQLGELAMSTGKLDMAEECLLHAMDLSGLLLLYSSLGDADGITKLASVA
KEQGKNNVSFLCFFMLGKLEECLQLLIESNRIPEAALMARSYLPSKVPEIVALWKKDLQK
VNPKAAESLADPNEYPNLFDDWQIALNVEATVAPKRGIYPPAEEYMNYAERSNESLVEAF
KNMHVDEEVLPDDNEDTVHEVVEDGEVEESQEDAVEVDAEYDGVEESQDDGVEVEAEGST
DGAVLVNGNSSEEQWVLTPEQ
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgccgctccggttggatatcaagaggaagctcgcgcagaggtcggagagggtcaagtcc
gtggatctgcatccgacagagccatggattttgtcaagtctgtactccgggagcgtttgc
atctggaactaccaaacgcagacaatggtgaaatcatttgaagtcacggatttaccagtt
cgatcggccaaattcattgcacgaaagcaatgggtagttgctggtgccgatgatatgttc
atccgtgtgtacaattacaatacaatggataaggtcaaggtttttgaagctcatactgac
tacattaggtgtgtggctgttcatcccacccagccttttgttctgtcatcttccgatgac
atgctgattaagctatgggattgggataaaggctgggtgtgcactcaaatctttgagggg
cattctcactatgtgatgcaagtcacatttaacccaaaagataccaacacttttgctagt
gcttcccttgatcgcacaataaagatatggagtcttggttcccctgaccctaactttaca
ctagatggccattcaaaaggtgtgaactgtgttgattacttcactggtggtgatcgaccg
tacttaattactggctctgatgatcagactgcaaaggtttgggattaccaaacaaagagc
tgcgttcaaacacttgaaggacatgcacataatgtgtctgctgtatgtttccatccggag
ctacctataataattaccggctcagaggatgggacggttcgaatgtggcactctaccacc
tacaggcttgagaacactcttaactatggccttgaacgagtttgggctttaggatacatg
aaggggtcaagaagggtcgtaatcggatatgatgaagggacaataatgataaaaattggc
cgtgaagttcctgttgctagcatggacagcagtggaaaaatcatatgggcaaagcataat
gaaatccaaacagttaatatcaagagtgttggtgcggacaatgagatagcggatggtgat
cggttaccattggccgtgaaggagttgggaagctgtgacctgtacccacaaaccttaagg
cacaatccaaatgggagatttgttgttgtatgtggagatggagagtacataatatacaca
gcattagcatggagaaacagatcttttgggtctgcacttgaatttgtttggtcaactgat
ggagaatatgcagtcagagaaagcacctccaggataaagatatacagtaaaaatttccag
gagaagaaaagtataaggccgtcattttccgcagaacgcatatttggcggagtgttactt
gctatgtgtacaaatgacttcatttgcttctatgactgggcggaatgcaggttaatacgc
cggattgatgtcaatgtgaagaatctttactgggctgacagtggcgatttagtaacaatt
gcaagtgacacatcattctacattctgaagtataatagggatgtagtttcatctcatttg
gatggagggggttcagttggtgaggaaggtgtcgaagatgcctttgaactgcttcatgag
atcaatgaacgtgtccggactgggctatgggttggtgattgtttcatctacaataattct
tcatggaggcttaattactgtgtaggaggagaggtcacaaccttatttcacctggatcgg
ccaatgtatttattaggatatcttgcaaaccaaagccgtgtttatcttatcgataagcaa
tttaatgttgttgggtataccttactccttagtttgatcgagtataaaacacttgtaatg
cgtggggattttgaccgtgcaaatgatgttttatcttctataccaaaggagcaatatgac
agtgtggcacgtttcttggaatcacggggaatgttggaggaagcccttgagattgcaaca
gacactaattacagatttgacctggctgtgcagcttggtcgacttgaaattgcgaaggcg
attgctactgaggttcaaagtgagtccaagtggaagcagctaggggagttagctatgtca
actggaaagcttgatatggcagaagagtgtctgctacatgctatggatctcagtggtttg
ttgcttttgtactcatctcttggggatgctgacggtattacaaaattggcatctgtagct
aaagaacaaggaaagaacaatgtttctttcctttgtttcttcatgctaggaaaattggaa
gaatgccttcaactgttaatagaaagcaaccgtattccggaagcagcattgatggcaaga
tcttatcttcctagcaaagtccctgagattgtggcattatggaaaaaagatctccaaaag
gtaaacccaaaagcagcagaatcattggctgatcctaacgagtacccgaacttatttgat
gactggcaaattgctctcaacgtagaagctactgttgcacccaaaaggggtatctatcca
ccggcagaggaatacatgaattatgctgaaaggtcaaatgagagtctagtggaagctttc
aaaaatatgcatgtagatgaagaggtgctgccagatgataatgaagatactgttcatgag
gtagttgaggatggtgaggtagaagagagtcaagaagatgctgttgaggttgatgctgag
tatgacggagtagaagagagtcaagatgatggcgttgaggttgaggctgagggttcaact
gatggtgctgtccttgtgaatggaaatagtagtgaggaacagtgggtgctgacacctgag
caatag

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