KEGG   Setaria viridis (green foxtail): 117848237
Entry
117848237         CDS       T07951                                 
Name
(RefSeq) LEC14B homolog isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:svs04121]
    117848237
Ubiquitin system [BR:svs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117848237
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML NBCH_WD40 Beta-prop_HPS5 PROPPIN WDR54 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Cytochrom_D1 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th PQQ WD40_like F420H2_quin_red WD40_2 NusG_II
Other DBs
NCBI-GeneID: 117848237
NCBI-ProteinID: XP_034585462
LinkDB
Position
3:3801079..3807122
AA seq 469 aa
MRGVRRSARGEASGKAHRELDRFDMANEVFHLTRARSELCHRARGATSARRKRPFSTFEL
LSARECGRTGGAGFAAADRAYVGSRHIPTKGPWGVDEVDSEAYVSQFSADGSLLVAGFRG
SRIRVYDVERGWKIHKDISCRSLQWTVSDIALSPDQQFLAYASLSPIVHIVNVQSSGKES
HANVNEIHEGLDFTGNEHDEDFGIFSVKFSKDGKEVVIGNNERSIYVYDLAANKVSVRIR
AHTDDVNAVTFADESGNILYSGSDDTLCKVWDRRCLVGGKSAGLLTGHLDGVTFIDSRGD
GRYFISNCKDQRIKLWDIRKMSSAVRARPVKMVDWDYRWMPFPSEAHHFKHPDDQSLATY
RGHSVWKTLIRCYFSPMHSTGQRYIYSGSSDKSVYIYDMVTGKTIERLSWHGSIIRDCTW
HPYHPTLVTSSWDGYLARWEASGNNDDLSMPKIMRTRWPVRLGAAAPTE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgcgaggagtgcggcggagtgctcgcggggaggcgtccgggaaggcgcaccgcgagcta
gaccggttcgacatggccaacgaggtgttccatctcaccagggccaggtcggagctctgc
caccgggctcgaggcgccacttcagcccgccggaagaggcccttctcgacgttcgagctc
ttgtcggcgagggagtgcggccgcacgggcggcgccgggtttgctgcggccgatcgcgcc
tatgttggcagcaggcacatcccgaccaaagggccgtggggcgtcgacgaagtggacagc
gaggcctacgtctcgcagttctctgctgatgggtcgctgctcgtcgctgggtttagggga
agccgcatcagagtttacgatgtcgagagagggtggaagattcataaggatataagctgc
aggagtctgcagtggacagtttcagatattgctctctcacctgatcagcaattccttgcc
tatgcaagtttgtcgcctattgttcacattgtgaatgtgcagagttctggaaaggaatct
catgctaatgttaatgaaattcatgagggattggatttcactggtaatgagcatgatgag
gacttcggaatattttctgttaaattctcaaaagatggtaaagaagttgttattgggaat
aatgaaagatcaatatatgtttatgatcttgcagcaaataaagtgtcagtccgcatccgt
gctcatacggatgatgtcaatgctgtgacctttgctgatgaaagtggcaatatattgtac
tctggaagtgatgatactctctgtaaggtgtgggacaggcgttgccttgttgggggaaaa
tcagcaggtcttttgacaggtcatttagatggagttacatttatcgatagccgtggtgat
gggcgttatttcatctccaattgcaaggatcagagaatcaaactttgggacatcaggaaa
atgtcttctgctgtgagagcgcgcccagtcaaaatggtggactgggactataggtggatg
ccattcccatcagaagcccatcattttaagcatccagatgaccagtctctggctacatac
agaggtcattcagtttggaaaacacttatccgttgctacttctcccctatgcacagcacg
ggccagaggtacatatactcaggatccagtgacaagtctgtatatatttacgacatggta
actgggaaaactattgagaggctttcgtggcatggctcgatcatcagagactgcacctgg
catccgtatcatccaacgctcgtcacctcctcctgggacggctatcttgcccggtgggag
gcctcggggaacaacgacgacctttcaatgccaaagattatgagaacgaggtggcccgtg
cggttgggcgcggcagcacccacggaataa

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