Setaria viridis (green foxtail): 117848276
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Entry
117848276 CDS
T07951
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00531
Glycosaminoglycan degradation
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117848276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
svs00536
]
117848276
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
117848276
Glycosaminoglycan binding proteins [BR:
svs00536
]
Heparan sulfate / Heparin
Enzymes
117848276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
117848276
NCBI-ProteinID:
XP_034585507
LinkDB
All DBs
Position
3:46315976..46320230
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AA seq
540 aa
AA seq
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MSLWFIFLLPLLCLPAWVRAEDYSDVTVIVRGSETIASTSDEFVCATIDWWPPEKCNYDQ
CPWGRASVLNLDLTNPLLAKAIQAFSPLRIRVGGSLQDQVLYGTPNLESPCDPFTKVSGG
LFGFSQGCITLERWDAINDLFVNTGAVITFGLNALQGRQQIRRGVWGGPWNSSNAREFME
YTVSKDYPIDSWEFGNELSGSGIGASVGAEQYGKDLVELQTIINELYGDSRRPLVVAPGG
FFDQKWFAELLEVSGPNVLNAMTHHIYNLGAGNDPQVPNRILNPQYLSRASDTFRSLQLT
IQRHGPWSAPWVGEAGGAYNSGSRLVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGN
YGLLDTETFVPNPDYYSALLWHRLMGTGVLSTDISGSSYLRAYVHCGKQKGGVAILLLNL
HRSMGFMVSVRNDLNVNLAEGQGIRRDNIFVHGLKRTVSWVGSKASDGYSKREEYHLSAE
DGNPFARTMLLNGVPLELTEDGDIPPLYPVEVSVNSPIYVAPLTIAFVVFPDFEAEACGR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatggtttatctttctcttgcctctactctgtctgcctgcatgggttcgagca
gaggattactcagatgtgactgtaattgttcgaggctctgagacgattgcttctaccagt
gatgaatttgtttgcgccaccattgattggtggcccccggagaagtgtaactatgaccaa
tgcccatggggaagggcttctgtcttaaatttggacctgactaaccctttgttggctaaa
gctattcaagcctttagcccattgcgtatcagagtcggaggctctttacaagatcaggtg
ttatatggaacaccaaatttagaatctccatgcgatccatttacaaaggtttcaggcggt
ctgtttgggttttctcaaggatgcataaccttggaaagatgggatgctattaatgatcta
ttcgtgaatacaggtgcagttattacatttggtcttaacgcgcttcaaggacgacagcag
atacgcagaggtgtttggggaggcccttggaattcaagcaatgctcgagagttcatggag
tacacagtttcaaaggactatcctatagattcttgggaatttggtaatgaattgagtgga
agtggaatcggagcgagcgtgggagctgaacaatatggaaaggacttagttgaactccaa
accatcatcaatgagttatatggagattccagaagaccactggtcgtagccccaggagga
ttttttgaccaaaaatggtttgctgagcttcttgaggtgtctgggccaaatgttctcaat
gcaatgactcatcatatttacaaccttggtgctggtaacgatccacaagttccaaataga
attttgaacccacaatatttgagccgtgcttctgacacattcagaagtctccaactcaca
atacaacgccatggaccatggtctgctccatgggttggggaagctggtggtgcatataac
agcggcagccgtcttgtgtccaatactttcctgaatagcttctggtatcttgatcaactt
gggcagtcagcaaagtatgacaccaaggtgtactgcagacagacgctgattggtggcaac
tatgggcttcttgacactgaaactttcgtgccaaacccggattactacagtgccttgctg
tggcatcggctcatgggtacaggagttctttctacagacatcagtggctcttcatacttg
cgtgcctatgtgcattgcgggaagcaaaaggggggcgttgcaatcctcttgctgaacctg
caccgaagcatgggattcatggtttcagtcaggaacgacctcaatgtcaatcttgcagag
gggcaagggatcagaagggacaatatctttgtccatggccttaaaaggacggtttcttgg
gtcgggagcaaagcttcagacgggtattccaagagggaagagtaccatctctcagcagaa
gatgggaacccctttgcccggaccatgctcctgaatggagttcctctagaactcactgaa
gatggcgacatccctccattgtatccagtggaagtttcggtcaactcaccgatctacgtt
gctcctctgaccattgcattcgtcgtcttcccagacttcgaggctgaagcttgtggccga
tga
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