KEGG   Setaria viridis (green foxtail): 117848322
Entry
117848322         CDS       T07951                                 
Name
(RefSeq) notchless protein homolog
  KO
K14855  ribosome assembly protein 4
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:svs03009]
    117848322
Ribosome biogenesis [BR:svs03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    117848322
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 DSE1_N WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_EML ASA1 NBCH_WD40 Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_DCAF4 NLE Beta-prop_RIG_2nd Beta-prop_DCAF12 CFAP251_N Beta-prop_WDR35_TULP_N Beta-prop_VPS8 eIF2A Beta-prop_NOL10_N WD40_RFWD3 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 RMC1_N Tricorn_2nd PAC11 Beta-prop_HPS5 WDR54 Ge1_WD40 Beta-prop_Nup120_160 TRM82_WD PD40 Beta-prop_ELP1_1st Tricorn_N Beta-prop_WDR75_2nd TRAP-delta Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 117848322
NCBI-ProteinID: XP_034585563
LinkDB
Position
3:complement(8064607..8069947)
AA seq 480 aa
MDSQAPPPAAATDANTSVMCQLVSPEGDHLGAALYLPQNVGPPQLQEIVNHLLHNEDKLP
YAFYIGDEELSVQLGTYMQQKNANVEVTLRIVYQPQALFRIRPVNRCSATIAGHTEAVLA
VSFSPDGKCLASGSGDTTVRFWDLDTQTPLFTCKGHKNWVLCISWSPDGKHLVSGSKTGE
LILWDPKTGKQLGSPLMGHRKWITAVSWEPAHLQAPCRRFVSASKDGDARIWDITTRKCV
ISLTGHTNSVTCVKWGGDGLIYTGSEDCLIKVWETTQGKLVKTLQGHGHWVNSLALSTEY
VLRTGAYDHTGKTYSTAEEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQPK
ARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGITGKFVAAFRGHVADVYQISWSAD
SRLLLSGSKDSTLKVWDIRTHKLKQDLPGHADEVYAVDWSPDGEKVASGGKDRVLKLWMN
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggacagccaagcccctcctcccgctgccgctaccgatgccaacaccagcgtcatgtgc
cagctggtcagtcccgaaggcgaccatctcggtgcggcgctctacctgccgcagaacgtc
ggccccccgcagctccaggagattgtgaatcacctcctccacaatgaggacaagctgccc
tatgcattttacattggagatgaagagctctctgtccagctgggcacttacatgcagcaa
aagaacgccaatgttgaggttactctgcgcatagtatatcagccacaagcacttttccga
attaggccagtcaaccgttgttctgctacgattgctggtcacacagaagccgtacttgct
gtttcttttagccctgatggaaaatgtttggcgagtggttcaggtgacaccactgttcgc
ttttgggaccttgatacacagactccattgttcacatgcaaaggacacaaaaattgggtt
ctctgcatttcgtggtcgcctgacggaaaacatcttgttagtggaagcaagacaggagag
cttatattatgggacccaaaaactgggaagcaattgggctccccacttatgggacacagg
aaatggattactgctgtatcttgggagccagcccatttgcaagctccatgccgccgcttt
gtaagtgcaagcaaggatggtgatgctcgcatctgggatatcaccacaaggaaatgtgtt
atttcccttacaggtcacactaattcagtgacctgtgtcaagtggggtggtgatggtttg
atttatacaggttctgaagattgtttgatcaaagtatgggaaacaactcagggaaagttg
gttaaaacattgcagggtcatgggcactgggtgaattcgcttgccttgagcacggaatat
gttctccgaactggagcatatgaccatactggcaagacatactcaaccgcagaggaaatg
aaagaggcagctctcgcgagatacaagaagatgaggggtaatgctcctgagagactagtt
tctggttctgatgattttacgatgtttctttgggaaccaacgattagtaaacaacctaaa
gctcgcatgactggtcatcagaagctcgtgaaccatgtgtacttttcccctgatgggcaa
tggttggcaagtgcctcctttgataaatccgtcaagttgtggaacggtatcacgggaaag
tttgttgcagctttcagagggcatgttgcagatgtctaccagatcagctggtctgctgac
agtaggcttctgctaagtggaagcaaggattccaccctaaaggtttgggatattcgaacg
cacaagttgaaacaagacctaccaggccacgcggatgaggtgtacgccgtggattggagc
cctgacggtgaaaaggtggcgtctggtgggaaggatcgggtcctcaagctttggatgaac
tga

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