Setaria viridis (green foxtail): 117848327
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Entry
117848327 CDS
T07951
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117848327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svs03400
]
117848327
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
117848327
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117848327
Prokaryotic type
117848327
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
RTT105
Motif
Other DBs
NCBI-GeneID:
117848327
NCBI-ProteinID:
XP_034585574
LinkDB
All DBs
Position
3:1196274..1201300
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AA seq
307 aa
AA seq
DB search
MPPSPPTPTAPKTIADFFTRPAKRLRAGATAPASASLSSSSSPSSLTPEQRRRADTNLAL
ARARRNLRLAESKAKASGGAAKLEELLVEKTWVEALDGELRKPYALELCRFVTHERLHGP
LPVYPPPHLVFHALNATPFDRVKAVIIGQDPYHGPGQAMGLSFSVPEGIKKPSSLGNIFK
ELEKDLGCTVPSHGNLERWAVQGVLMLNTVLTVREHQANSHAKKGWEEFTDAVIKTISQK
RSGLVFLLWGNSAQSKTRLIDETKHHILKSAHPSGLSANRGFFGCRHFSKTNQILEKLGL
SAIDWQL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtcccctcccaccccgacggcgcccaagaccatcgccgacttcttcacgcgc
cccgccaagcgcctccgcgcgggcgctaccgccccggcgagcgcctccctctcctcctcc
tcatccccctcatcgctcacgccggagcagcgccgccgcgccgacaccaacctcgcgctc
gcccgagcgcgccgcaacctccgcctcgccgaatcgaaagccaaagcgtcggggggcgcc
gcgaagctggaggagctcctcgtggagaagacgtgggtggaggcgctggacggggagctg
cgcaagccctacgcgctcgagctctgccgcttcgtcacccacgagcggctgcacggcccg
ctgcccgtctatccgccgccgcacctcgtctttcacgcgctcaacgccaccccgttcgac
cgcgtcaaggctgttatcatcggccaggatccatatcatggccctggtcaggccatggga
ttatctttctcagtaccggaggggataaaaaaaccttccagcttaggtaacatatttaaa
gagctggaaaaggacctaggttgtactgtgccatcacatggaaatttggaaagatgggct
gtgcagggtgttcttatgctcaataccgtactgactgtgagggagcatcaagcaaactca
catgccaaaaaaggttgggaggagtttactgatgctgtcattaagactatatcacaaaag
agatcaggactggtctttcttctttggggaaattctgctcaatcgaaaacaagattgatt
gatgaaacaaaacaccacattttgaaatcagctcacccatcaggcctgtctgcaaaccgg
ggtttctttggatgcaggcacttttccaaaacaaatcagatcctagagaagctgggacta
tctgcaatcgattggcagctctag
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