Setaria viridis (green foxtail): 117848424
Help
Entry
117848424 CDS
T07951
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117848424
Spliceosome [BR:
svs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117848424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
117848424
NCBI-ProteinID:
XP_034585722
LinkDB
All DBs
Position
3:complement(22137346..22142458)
Genome browser
AA seq
454 aa
AA seq
DB search
MAEDGGDRDQQQQAAGGAGAGVAAAEGRGRESVKLFVGQVPKQMTESELAAMFSRVALVD
EVTVIRDRATRVSRGCCFLICPSREEADKAVTAYHNKCTLTGASSPLQVKYADGELERLE
HKLFVGMLPKNVTDAEMTDLFSQYGNIKDLQILRGSQQASKAGCAFLKYETKEQAVAAIE
ALNGKHKIEGSSVPLVVKWADTEKERQARKAQKAQFQSSNMLNANAMQQTSLFGALQMGY
VPQYNGFGYQPQGTYGLMQYPPLSPMQNQAAFQNMVQPVNQGSSIRGANSELSPNSAPRS
FNSTQLGSPYSPLPGMQYPGAYPGGAINNRPFANSHNPIKVQNSNANSPTSSGASSNPGP
QIEGPPGANLFIYHIPQEFGDHDLASAFQSFGRVLSAKVFVDKATGVSKCFGFVSYDSPA
SAQTAISMMNGFQLGGKKLKVQLKRDNSKHSKPF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacggcggcgacagggaccagcagcagcaggcggcggggggcgccggcgcc
ggggtggcggcggcggaggggcgcggcagggagagcgtgaagctgttcgtggggcaggtg
cccaagcagatgaccgagtccgagctcgccgccatgttcagccgcgtggcgctcgtcgac
gaggtcaccgtcatccgcgacagggccactagggtctcgcgaggttgctgcttcctgatc
tgcccatcaagggaggaggcggacaaggcagtgactgcatatcacaacaagtgtacacta
actggggcatcaagtccattgcaagtaaaatatgctgatggagagttggaaagattggag
cacaagctttttgttggaatgctcccgaaaaatgtaacagatgctgaaatgactgattta
ttttcacaatatgggaatatcaaagatttgcagattttgagaggttcgcagcaggcaagc
aaagctggctgtgcctttctgaaatatgaaaccaaggagcaagctgtagctgcaatagaa
gctctaaatggaaagcacaagatagagggttcaagtgttcccttggttgtgaaatgggct
gataccgaaaaggaaagacaggctcgaaaagcacaaaaagctcaattccagtcctctaac
atgttgaatgcaaatgccatgcagcagacctcattgtttggagctttacagatgggatat
gtacctcagtacaatggatttggctaccagccacaaggaacctatggacttatgcagtac
cctcctctatctcctatgcaaaatcaagctgccttccagaacatggttcagcctgttaat
caaggaagctcaatccgtggagctaattccgagctttcccctaattcagctcctagatca
tttaattcaacgcagttaggaagcccctattcacctttgcctggcatgcagtatcctgga
gcgtatcctggtggtgctattaacaatcgtccttttgcaaattctcacaatccaatcaaa
gttcaaaattcaaatgctaattcacccacgtcttcgggtgccagcagcaatcctggtccc
cagatagaaggtcctcctggagccaacttgttcatataccacataccacaagaatttggt
gaccatgatcttgcaagtgcatttcagagttttggtagagttttgagtgctaaagttttt
gtagacaaggcgactggtgttagtaaatgctttggttttgtaagctatgattctccagct
tctgcacaaactgccattagtatgatgaatggattccaattaggtggtaaaaaattgaaa
gtacagctcaagcgagacaacagcaagcacagtaaacctttctga
DBGET
integrated database retrieval system
