Setaria viridis (green foxtail): 117848468
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Entry
117848468 CDS
T07951
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
svs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
117848468
Enzymes [BR:
svs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
117848468
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NAD_binding_10
Methyltransf_2
Motif
Other DBs
NCBI-GeneID:
117848468
NCBI-ProteinID:
XP_034585782
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Position
3:complement(5567907..5571970)
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AA seq
666 aa
AA seq
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MATAYKPKNILITGAAGFIASHVAIRITKKYPDYKIVVLDKLDYCSNLKNLLPVSSSPNF
KFVKGDIASADLVNFLLVTENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACK
ITGQIKRFIHVSTDEVYGETDEDAVVGNKEASQLLPTNPYAATKAGAEMLVMAYGRSYGL
PVITTRGNNVYGPNQFPEKLIPKFILLAMRGEPLPIHGDGTNVRSYLYCEDVAEAFEVIL
HHGEVGHVYNIGTKRERTVIDVAKDVCKLFNLEADKVIMFVENRPFNDQRYFLDDEKLKS
LGWAERTPWEEGLKKTMEWYVANSDYWGDVSGALLPHPRTLMMPGYEGSEEIKGILSQFN
NIQTKVASTSDSAPETHAFKFLIYGRTGWIGGLLGKICEKQGIPYEYGKGRLQERSSLIL
DIQTIKPTHVFNAAGVTGRPNVDWCESHKPDTIRTNVVGTLTLADVCREHGLLMINYATG
CIFEYDARHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYENVCTLRVRMPISSDL
SNPRNFVTKISRYNKVVNIPNSMTILDELLPISVEMAKRNLRGIYNFTNPGVVSHNEILE
MYKQYIDPSFKWTNFNLEEQAKVIIAPRSNNEMDASKLKKEFPELLSIKDSLIKYVFEPN
RKLPIN
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcatataaacctaagaacattcttattacgggagctgctggctttatcgcc
tcccatgtcgcaatccgtattaccaagaagtaccccgattacaagatcgtcgtccttgac
aagcttgactactgctctaatctgaagaacctgctccctgtgagctcttcaccaaacttc
aagtttgtcaagggcgacattgcaagcgctgatcttgtcaacttccttcttgtcacggag
aacattgataccataatgcactttgcagcccagactcatgtcgacaattcatttgggaat
tccttcgaatttaccaagaacaacatttatggtacccatgttcttcttgaggcctgcaag
atcaccggacagatcaagaggttcatccatgtcagcactgatgaggtctacggggagaca
gatgaggatgcagttgttggcaacaaggaggcatcacagctgctccccactaacccatat
gcagccaccaaagctggagcagagatgcttgtaatggcatacgggagatcctatggcctg
ccggttataactactcgaggaaataatgtctatggccctaatcagtttcctgagaagctt
atcccaaagttcattctcttggccatgagaggggagcccctcccaatccatggtgatgga
accaatgtccgtagctacctctattgtgaggatgttgcagaggcatttgaggtaattctt
catcatggagaagttgggcatgtttataatattggaacaaagagagagaggacggtcatt
gatgtggcaaaagatgtttgcaagcttttcaatttggaagctgacaaagtcatcatgttt
gtcgagaacagacctttcaacgatcaaaggtatttcttggatgatgagaagctcaagagc
cttggatgggctgagcgcaccccatgggaggaaggcttgaagaagacaatggaatggtat
gtagcaaattctgattattggggagatgtttctggtgcattgctgcctcatccgaggacg
ctaatgatgcctgggtatgagggctctgaggagattaaaggaatactcagtcagttcaat
aacattcagacaaaggtggcttcaacatcagatagtgctccagaaacgcatgccttcaag
ttcttgatatatggtaggacaggatggatcggtggacttcttggaaaaatatgtgagaag
caaggaattccatatgaatatggaaaaggtcgcttgcaagagcgttcttcgctcatcctg
gatatccaaactattaaaccaacacatgtcttcaatgctgctggtgttactggcagaccc
aatgttgattggtgtgaatcacacaagccggacaccattcgtaccaatgttgtgggcacc
ctgactctagctgatgtgtgtagggagcatggcttattgatgataaattatgccactggg
tgcatatttgaatatgatgcacgtcatccagaagggtcaggtatcggcttcaaagaggag
gatacaccaaattttactggttcgttctactcgaagactaaggcaatggttgaggagtta
ttgaaggagtacgagaatgtctgcaccctacgagtccggatgccaatatcttctgacctc
agcaaccctcgaaactttgtgacaaagatcagccgttacaacaaggtggtgaacatccct
aacagcatgacaatattggacgagctcttgcctatctcagtggagatggcgaagaggaac
ctgcggggcatttataatttcaccaaccccggcgtcgtcagccacaacgagatcctggag
atgtacaagcagtacatcgaccccagcttcaagtggacaaacttcaaccttgaggagcag
gccaaggttatcatcgcaccccggagcaacaatgaaatggatgcaagcaagctgaagaag
gagttccccgagctgctgtcgatcaaggactcattgatcaagtatgtcttcgagcctaat
cggaagctgcccataaactga
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