Setaria viridis (green foxtail): 117848544
Help
Entry
117848544 CDS
T07951
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
svs04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117848544
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117848544
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117848544
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117848544
03036 Chromosome and associated proteins [BR:
svs03036
]
117848544
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117848544
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117848544
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117848544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
TOF-1-like_helical
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
117848544
NCBI-ProteinID:
XP_034585881
LinkDB
All DBs
Position
3:complement(6907736..6910832)
Genome browser
AA seq
480 aa
AA seq
DB search
MWKQFLGKISRKSPKSGSGSPPQKFPPSRVANGAEAELRASPPPQASAVAAAPGAETRED
VFLRKLNVCCVVFDFAAERGRDSPELERKRLVLLSLVDCVSAAEEPLTEAMISACVRMFA
INLFRVFPPKLRSCGATDEDEPFFDPSWYHLQVVYELLLRFVMSPVVDVKVARKYMDNSF
ISRLLDLFDSDDPRERECLKTVLHRIYGKFMGNRPFIRKAVSNIFYRFVFETDHHNGIAE
LLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKTVGVYLPQLTYCITQFIEKEPKLTG
TVIRGLLKYWPVTNSQKEMMFLGELEEVLELTETADFQKCVVPLFRRIAQCLNSSHFQVA
ERALFLWNNEHLFDLISQNRQVILPIIYPALERNARWHWNQSVLNVTMNVRKMFFEMDER
LLLACQTNFQEEEKKRAASEERRRLVWEHLERNAAFHPVTGDIGFAVPPTSAPLVAPTMT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcagtttcttggcaagatctcgcggaagtctcccaaatccggcagcggctcg
ccgccgcagaagttcccgccgtcgcgtgtagccaatggggctgaagcggagctgagagcg
tcgcctccgccgcaggcgtcagccgtcgccgcggcgcctggggcggagaccagggaggac
gtgttcctccgcaagctcaacgtctgctgcgtggtgttcgacttcgccgccgagcggggg
agggattcgccggagttggagaggaagcggctggtgctcttgtccctcgtcgactgcgtc
tccgcggccgaggagcccctcacggaggcgatgatctcggcctgcgtccgaatgttcgcc
atcaacctcttcagggtcttcccgcccaagctccgctcctgcggcgccactgatgaggac
gagccattctttgacccctcctggtaccacctgcaggtcgtgtatgagctgttgctccgg
tttgtgatgtcgcctgttgtcgatgtgaaggttgctaggaagtacatggacaattcattc
atctctaggcttctggacctgttcgattctgatgaccctagggagagggaatgcttgaag
acggttttgcataggatatatggaaagttcatgggcaatcgaccatttatccgcaaggcg
gtgagcaacatcttttataggtttgtgtttgagacggatcatcacaatgggattgctgag
ctgttggaggtgtttgggagcgtgattagtggttttgcaaagcctctgaaggaggagcat
aagttgtttctgtggaaggcgttgattccacttcacaaaccgaagacagttggagtgtat
ttgccacagttgacatactgcattacacagtttattgagaaggaaccgaagctcacaggg
actgttatcagaggcctcctgaagtactggccggtgacgaacagtcagaaggagatgatg
ttcttgggtgagttggaggaggtgctggagttgacagaaacggctgacttccagaagtgt
gtggttcccttgtttcgcaggattgcgcaatgcctgaatagctctcattttcaggttgct
gaaagggccttattcctgtggaataatgaacatttgtttgacctgatttcccaaaaccgc
caagttatcctgccaataatatatcctgctctggaaaggaatgctcgttggcactggaat
cagtcggttctaaatgtaacaatgaatgtgaggaaaatgttcttcgaaatggatgagaga
ttgctgctagcttgtcagaccaatttccaagaggaggaaaagaagcgagctgcatctgag
gaacgaagaaggcttgtatgggagcacctagagaggaatgctgcatttcatccagtaacc
ggagacattggctttgcagttcctcctacatctgctcctctggtggctcccactatgaca
tga
DBGET
integrated database retrieval system
