Setaria viridis (green foxtail): 117848557
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Entry
117848557 CDS
T07951
Name
(RefSeq) zinc finger CCCH domain-containing protein 36 isoform X1
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117848557
Transcription factors [BR:
svs03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
117848557
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Ortholog
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GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
117848557
NCBI-ProteinID:
XP_034585897
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Position
3:14097551..14108459
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AA seq
601 aa
AA seq
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MASAGGGGGATGEIPEVDMEVVERPPEEPGRVGLKRVRDPHSALGSYGFYGVTTAEKKPM
LQPHVNALRLSSPSLGEYPENKTKRVTKICTFYAQGWCQNGKNCTFLHDREGFGSAKAGL
LAPAGSGNHRGSEEGSQVQHQSNLKVPQFKYAEGSSKYELYRSLVHVYGEDNERLAHLAD
KQNLTTPGVSQGLPGSIDDSFTKRPTAPINELVRSLVVHEKNHKPFMGHPIGLAAETRRY
LDVNTLNSDHQFQSSGMSISSDTLQFREKLSAYGGTTDNLPNTHQKEHRSSHASYSSCNL
TGFRNLGYATSEISLGSPSLRATSQLGIQSHHLFRTGIEKVNLHRHIDVDKGCGTSRPAL
LSSSSLDPSIISAGPLSPIKDEVWETSVPFVPSFSFPTPPGSPYDPFVDCIEPPKVGNTD
NLKSSNISFSISSQHTNPDVITDKSLNRDDKLTRNMSAIGANGPACLIASDRGRSSSLDV
NNRVKACDRKNNVGSSDEKARDFRFHLAEHIKDLIKPIWKEGNLSKDAHKQVVKKSVEKV
VDSIEPNQVPTTKEMIAKYITTNGSKIEKLVKASYSMRSKLLNVELLLDQDWSLDLMSMG
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgccggcggtgggggtggggcgacgggcgagatcccggaggttgatatggag
gtcgtggagaggccgccggaggagccggggcgggtcggcctgaagagggttagggatccg
catagcgccctgggttcctacggtttttatggagtgactactgccgagaagaaaccaatg
ttgcagcctcatgttaatgctctgagattgagtagcccttctcttggtgaatatccggag
aataaaacaaaaagggtcaccaaaatatgtaccttttacgctcaaggttggtgccagaat
ggaaagaattgcacttttcttcatgacagagagggttttggttctgcaaaggctggtctg
cttgcaccagctggttctgggaatcatcgaggttctgaagaaggatcccaagtacaacat
caatccaacttgaaagtgcctcagttcaagtatgcagagggttcatcgaaatatgagcta
tatcggagccttgttcatgtgtatggtgaagataatgagaggttggcacatcttgctgat
aaacaaaaccttaccactccaggggtttcacaagggctccctggcagtattgatgattca
tttactaaaaggccgactgctcctataaatgagctggtgcggagtctagtagttcatgag
aagaaccacaaacctttcatgggacaccctattggtttggctgctgaaacaagaagatac
cttgacgtgaacaccttaaattcagaccaccagtttcaatcatctggcatgtctatttcg
tccgatactctccaattccgtgagaagctgtcagcttatggtggaacaacagataatctt
cccaacacacatcagaaagaacatcgttcaagccatgcctcatatagttcatgtaactta
acaggattcagaaatctaggctatgctacctctgaaatttccttaggaagcccaagtctc
cgagcaacttctcagctgggaatacagtcccatcatctgttcagaactggtattgagaag
gttaatctccatagacatattgacgttgacaagggctgtggtacttctagacctgcacta
ctttcaagcagttcacttgacccttctatcatatcagctgggccactttctccaatcaag
gatgaggtctgggaaacatcagtgccttttgtaccttcttttagttttccaacacctcca
ggaagtccatatgacccattcgttgactgtattgaacctcctaaagttgggaatacagat
aatctgaagtcgtccaatatatccttcagtatttcaagtcagcatacaaatccggatgtc
atcactgataaatcactgaatcgcgatgacaagttaaccaggaatatgtctgccatagga
gcaaatggacctgcatgcttgattgcatctgatagaggacgcagctctagcctggacgtt
aataacagggtgaaagcttgtgacagaaaaaataatgtaggtagtagcgatgagaaagca
agagactttcgttttcatttggcagaacatataaaggacttgatcaaaccaatatggaag
gaaggtaatctgagtaaagatgctcataaacaggtagtgaaaaaaagtgttgaaaaagtt
gttgattcaattgagccaaatcaagtaccaactactaaagagatgattgccaaatatatt
accaccaatggatcaaagatagaaaaacttgtgaaggcatcgtacagcatgagatccaag
cttctaaatgttgaattactgctcgaccaagattggagcttggacttgatgtcgatggga
gcttga
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