Setaria viridis (green foxtail): 117848567
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Entry
117848567 CDS
T07951
Name
(RefSeq) protein argonaute 1B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117848567
03036 Chromosome and associated proteins [BR:
svs03036
]
117848567
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117848567
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117848567
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117848567
microRNA pathway
RISC loading complex
117848567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
117848567
NCBI-ProteinID:
XP_034585912
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All DBs
Position
3:4637336..4646137
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AA seq
1102 aa
AA seq
DB search
MVRKKRTGPGESSGEAPGVPGQGSSQRPETTQQHGGGRGLLPQQGARGAGQHQGRGGYQG
RGGPPESQPRDYQGRGGYQGRGGPPSQHPGGPPEVQLRGYQGRGGPPSQHPGGGPPEYQG
RGGPRPRGGLPQPHYGRRGGGSVGPSVPPGPSRSVPELHQAPYVQYQAPVAVSPSTPGAS
SSSQPAEAEVSTGQVQQQFQELAIRGQSSTSQAVQMAPASSKSVKFPLRPGKGTYGSRCI
VKANHFFAELPDKDLHHYDVSITPEVTSRGVNRAVMGELVTLYRQSHLDGRLPAYDGRKS
LYTAGPLPFTSRTFEITLQDEEDSLGGGQGGQRRQRVFKVVIKFANRADLHHLAMFLSGR
QPDAPQEALQVLDIVLRELPTARYCPVGRSFYSPNLGRRQQLGDGLETWRGFYQSIRPTQ
MGLSLNIDMSSTAFIEPLPVIDFVAELLNRDVSVRPLSDSDRVKIKKALRGVKIEVTHRG
NMRRKYRISGLTSQATRELSFPIDDRGTVKTVVQYFLETYGFSIQHTSLPCLQVGNQQRP
NYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQEREKDILQTVHHNAYFEDPYAQE
FGIKIDERLAAVEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVSSWACIN
FSRNVQDNAARMFCQELAQMCQVSGMDFALEPVLPPSYARPEHVERALKGCYQDAMNILR
PQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKANKQQYLANVALKI
NVKVGGRNTVLVDALARRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVT
KYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMVKELLISFRRATGQKPQRIIFYRDG
VSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDQRSVDRSG
NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCY
TYARCTRSVSVVPPAYYAHLAAFRARFYLEPDTSDSGSMVSGATMSRGPQPGTSRSSRAV
GNVAVRPLPALKENVKRVMFYC
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaaaagaactggccctggagagagttctggggaggctcctggagtgcct
ggacagggctcctcacagcgacctgagacaactcaacagcatgggggaggacgtggttta
ctgcctcaacaaggtgcccgtggtgcagggcaacaccagggtcgtggtggatatcagggc
cgtggagggccacctgagtctcaaccgcgtgactaccagggccgcggtggatatcagggc
cgtggaggcccaccttcacaacatccaggtgggccacctgaggttcaactgcgtggttac
cagggccgtggaggcccaccttcacagcatcctggtggtggaccacctgagtaccaggga
cgtggtggtccgcgccccagagggggattgcctcagccacactatggcaggcgtggggga
ggtagtgttggaccaagtgttcctccaggtccatcgagatcagttcccgagctgcaccaa
gccccatatgtccaatatcaagcccctgtggcggtatcaccatccacaccgggagctagc
tcatcctcgcagcctgcagaggccgaggtgagcactgggcaagtccagcaacagtttcag
gaacttgctattcgtggtcagagttcaactagccaagccgttcagatggcaccagcatca
agcaaatcagttaaattcccattgcgccctggcaagggtacttatggttccaggtgcatc
gtgaaggcaaaccatttctttgctgagctgcctgataaagaccttcatcactacgatgtt
tctataacgcccgaggttacatcacgtggcgtcaatcgtgctgttatgggagagcttgta
actctttatagacagtctcatttggatgggcgtctacctgcatacgatggaaggaagagc
ctttatacagcagggccattgccatttacttctaggacatttgaaattacactgcaagat
gaggaagatagtcttggtggaggacaaggaggccaaaggcgccagagggtatttaaggtg
gtgatcaaatttgctaaccgtgctgatctccaccatttggctatgtttctatctgggagg
caaccagatgctcctcaagaggctcttcaagtacttgacattgtactacgtgaattgcct
actgccaggtattgccctgttggcaggtcattttattctcccaatttagggagacgccag
caacttggtgacggtttggaaacttggcgtggtttctaccaaagcataaggcccacacag
atgggcctttctctgaatattgatatgtcctctactgcatttattgagcccctccctgtg
attgatttcgttgctgagcttcttaacagagatgtctcagttagaccattatctgattct
gatcgtgtgaagattaaaaaggccttacgaggtgtaaaaattgaagtcacacaccgagga
aacatgcgaaggaaatatcgtatatctggcctcacttcacaagcaacaagggagttgtca
ttccctattgatgatcgtggtaccgtgaagactgtggtgcaatacttcctggagacttat
ggcttcagtattcagcacaccagtttgccttgcttgcaagtgggcaatcaacaaagacca
aattatctgcctatggaggtctgtaagatagttgagggacagcgttactcaaaacgactg
aacgagaaacagatcactgctctactgaaagtgacttgccagcgtcctcaagagcgcgag
aaagacatcctgcagactgtgcatcacaatgcgtacttcgaagatccatatgcacaggaa
tttggcataaagattgatgagcgtcttgcagctgtcgaagctcgtgttctgcctccccca
aggctgaagtaccatgatagtggcagagagaaggatgtgttgccaagagtcggtcagtgg
aacatgatgaataagaaaatggtcaatggtggtagagttagcagctgggcatgcattaac
ttctcacgaaatgtgcaagataatgctgccaggatgttctgtcaagagctggctcagatg
tgccaagtatctggaatggactttgcacttgaacctgtgcttcccccatcgtatgcgagg
cctgaacatgtcgaaagagcacttaagggatgctatcaagatgccatgaacatactcaga
cctcagggccgagaactggacctactgattgtaatactgcccgacaataacggttcactt
tatggggatcttaaaaggatctgtgagactgatcttggattggtctcccaatgttgtctg
actaaacatgttttcaaggcgaacaagcagcagtatcttgcaaatgttgcccttaaaata
aatgtgaaggttggaggaaggaatactgtgcttgtagatgctttggcaaggagaatcccc
cttgtcagtgacagaccaaccattatatttggtgctgatgttacccatccccatcctgga
gaagattccagtccttccattgcagctgtggttgcttctcaagactggcctgaggtcacc
aagtatgcaggattagtgagtgcccaagcccatcgccaagagttgatacaggatcttttc
aaagtatggcaagatccccaaagagggactgtcactggtggcatggtcaaggaacttctc
atttctttcaggagggcaacgggacagaaaccccagaggatcatattctacagggatggt
gttagtgagggacagttctatcaagttttgttgtatgaacttgatgccattagaaaggcc
tgtgcatcattggagcccaattaccagcctccagttacttttgtagtggtccagaagcgt
catcacactaggttgtttgctaacaaccataaagatcagcgttctgttgatagaagtgga
aacatactgcctggcactgttgtggattcaaagatttgccatccgactgagttcgatttc
tacctgtgtagccatgctggcattcagggaacaagccgccccgcgcattatcatgttttg
tgggatgagaacaaattcacagctgatgggttacaatctctcaccaacaacttgtgctac
acgtatgctaggtgcacgcgctcagtatcagttgtgcctcctgcatactatgctcacctg
gcagccttccgagctcgcttctacttggagccagatacctctgacagtgggtcgatggtg
agcggtgctacgatgagccgtggtcctcaaccagggacttctcgcagctccagggctgtt
ggaaatgttgctgtgaggcctctacctgccctcaaggaaaatgtgaagcgcgtcatgttt
tactgctaa
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integrated database retrieval system
