Setaria viridis (green foxtail): 117848578
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Entry
117848578 CDS
T07951
Name
(RefSeq) pumilio homolog 1
KO
K17943
pumilio RNA-binding family
Organism
svs
Setaria viridis (green foxtail)
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Gene cluster
GFIT
Motif
Pfam:
PUF
NABP
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
117848578
NCBI-ProteinID:
XP_034585924
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Position
3:4366225..4373176
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AA seq
871 aa
AA seq
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MVTEMAARGGEAFGAEADRDFEVFRSGSAPPTVEGAMGAAAAAGSLFLDDDLRADPAYQS
YYYSNAHLNPRLPPPLLSKEDWRSSHHRLRSSGLGGIGDGRRQQQPAAAAEGTVGLPGID
LGRHRSFSNVFQDDSYQRDMDRQTANHNSNDLLGSSGIQYGLHRGSGAMGGLHSSNNSRG
LDEIQNNDLSSNTYASILGSSLSRSASPDPELVRRAPSPSLPPIGVKVGANDKKINGGSS
SFRRSSSAIGESDDLVAALSGMSLSSRAMSGQTMDQSQLYQDVDNVQKFLFDRQGDQSNG
NQQHSYMRRPEHGQSKVPDGYSPNLANSSTMRNQINAGSFTSFDNLSLGSGFASPRIGSR
SPGGTVSSRQNLAGMSNMLNYSGIGSPTASPSLQTPIDPAYIQYLAQLAASCDDPLMDRG
HLGNSYMDLLGPQKANLGPLLQSQKQYGYYGNLGFNLGYAGSPLTSPVLPSSPIAPGSPL
RHGDRSMRFPSGMRSFGGSFGSWNSGMGGKMDANLMPSLLEEFKSNKSKSYELSEIAGHV
VEFSADQYGSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQ
IKELAGQLIGRVLALSLQMYGCRVIQKAIEVVDLDLQTKMVAELEGHVMRCVRDQNGNHV
IQKCIECIPQHAIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQS
VCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPV
ERQVLIGEMLGSTSESEPLEVMMKDQFANYVVQKVLETCDDQQREMILTRIKTHLNTLKK
YTYGKHIVARVEKLVAAGEKRLGLQPACTAA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggagatggcggcgcgcggcggcgaggcgttcggcgcggaggcggaccgggac
ttcgaggtcttccgcagcggctccgcgccgcccaccgtcgagggcgccatgggcgccgcc
gcggccgccggcagcctcttcctcgacgacgacctccgcgccgacccggcctaccagagc
tactactactccaatgcgcacctcaacccgcgcctcccgccgccgctgctctccaaggag
gactggcgctcctcgcaccaccgcctccgctcctccggcctcggcgggatcggggacggc
aggaggcagcagcagccggcggcggctgcagaagggacggtggggctgcccgggatcgat
cttggtcgtcataggagcttctccaacgtctttcaggatgactcataccaacgggatatg
gataggcagactgccaaccacaatagtaatgacttgctaggttcttctggaatacagtat
ggcctccatcgtggatctggagctatgggaggcctgcactctagtaataattcacgaggc
ttggatgaaattcagaacaatgatttatcatcaaatacatatgcttctattttagggtca
tcgctttctcgaagtgcatctccagatcctgagcttgtgaggagggcccctagtccatct
ctgcctccaattggtgtgaaagttggtgctaacgacaagaagattaatggtggttcgtct
tctttccgccgcagttcatctgctataggtgaatctgatgatcttgtggcagctttatct
gggatgagcttatcatctagggcaatgagtgggcaaactatggaccagtctcagctctat
caggatgttgataatgtccagaaatttctgtttgatcgacagggtgaccaatcaaatggc
aatcagcagcactcctacatgagacgtcctgagcatggacagtctaaagtacctgatggc
tattctccaaacttggccaattcatctacgatgagaaaccagattaatgctggcagtttc
acatcatttgacaatttgtcacttggatctggctttgcttcccctagaattggttccaga
tcccctggcgggactgtatcttctcgacaaaatttagctggtatgtctaacatgctaaac
tacagtggaattggaagtccaactgcatcaccttcccttcagactcctattgatccagcg
tatatccagtaccttgctcaacttgcagcaagctgtgatgatcctctcatggacaggggc
catctgggaaattcttacatggacttacttggtcctcagaaagctaaccttggcccttta
cttcagtcacaaaagcaatatggttactatggcaatcttggatttaaccttggttatgct
ggaagtccattgacaagtcctgttcttccctcttcacctattgcgccaggcagtccgctt
aggcatggtgatcgtagcatgcgctttccatcaggcatgagaagctttggtggctccttt
ggttcatggaattcaggcatgggtgggaagatggatgccaatttgatgccctcgcttctg
gaggaattcaagagcaacaaaagtaaatcatatgagctctcagaaatagcgggccatgtt
gttgagtttagtgcggatcaatacgggagccggttcatacaacaaaagctagaaacagcc
agtactgaagaaaaagacatggttttctcagaaatcatgcctcaagctctcacactgatg
actgatgtatttggaaattatgttgttcaaaagttttttgagcatggaagcactgcccag
ataaaggaattggctggtcaacttattggacgtgtccttgctctcagtcttcagatgtat
gggtgccgggttatacagaaggctatcgaggtcgttgatttagatctgcagactaaaatg
gttgcagagctggagggacatgtcatgcgttgtgtacgtgatcaaaatgggaaccatgta
atacaaaaatgcatagagtgcattcctcagcatgctatcgagtttattgtctcaactttc
tatggccaagttgtaatgctatccacccatccatatggttgtcgagttattcagagggtt
ctagagcactgtgatgatcctaaaacacagcaaataatgatggatgagattctccagtct
gtttgcttgctagctcaggaccagtatggcaattacgttgttcagcatgttctggaacat
ggcaaaccccatgagagatctgctattattgagaagttgattggccaaattgtgcaaatg
agccagcaaaagtttgcttcaaatgtcattgagaagtgcttagcctttggaaatcctgta
gagcgccaggttctgattggcgagatgcttggatccactagtgaaagtgaacctcttgag
gtaatgatgaaagaccagtttgctaactatgtggtgcagaaggtgttagaaacttgtgat
gatcagcagagagagatgatccttacaaggataaaaacacatctgaacaccctcaagaag
tacacctacgggaagcacatagtagcacgcgtagagaaacttgttgctgctggagagaag
cgccttgggcttcaaccagcatgcactgctgcctga
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