Setaria viridis (green foxtail): 117848675
Help
Entry
117848675 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117848675
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117848675
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117848675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117848675
NCBI-ProteinID:
XP_034586063
LinkDB
All DBs
Position
3:complement(27625409..27630637)
Genome browser
AA seq
846 aa
AA seq
DB search
MDDTCAVCAETLEWVAYGPCGHRDVCSTCVVRLRFVMDDKKCCICKTVCPSVFVTKALGE
YTRVVNDFSLFPAGVNEGKTGDFWYHEDTQAYFDDVDHYKMIRAMCRLSCSVCDNAEDQV
ALAAQAKRKSKFRSIDQLKGHLFHVHRLHMCNLCLEGRKVFICEQKLYLRSQLTQHMKTG
DSEVDGSEVERSGFAGHPVCQFCKTSFYGDNELYTHMSREHYSCHICQRQHPAQYDYFRN
YDDLELHFRKDHFLCEDEACLAKKFVVFPSEAELKRHNAMEHGGRMSRAQRNAALQIPTS
FIYRRNEQDQRRGRGRGRNAHHDGTESHISSSAQNGRATADDGHVGRVDNVSGFLQSLSV
GSSSAGAEVSSRTGRALEQLSFPPLSDPDIPDTRVDSVPDETSFPSLSEQQSRYALALNQ
SARGTARLGDESLFPPLPGSSNNRAPASAQQGLQSLAKSTLAARLQQRSKGPVKVLNTAR
PRPSENPELLPSSTQTWPTPDQGLLLSGSSQLRMGTQTRENGFMPAVFSNSAWNPVAPNK
MKHSVSTPNLVSGGSSGQASSSTAYGSNRSQEPPQGSQALPVAEDVRAANKSLVERMRSA
LGMDEDRYSAFKEIAGEYRQGIIDTSEYLSYVEQFGLSHLVPEMARLLPDPQKQRELADA
YYTNIRFKSLQENGGGGTTSHEASRKKKGKGKAPVTESSAAKDVKDALADNFLDTVRRLQ
SNHQAQEGEAEVLSKDGYRPSKGVQLSAGSSSSLDSDTGFNSKASGAKDNAGKGGGNCSS
KQPKKTSKFLRARLGDNSLATLDLSRPSASPERPERESQGPQMGLPVRGAWKNGGGQKLF
SSNGRK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacctgtgcggtgtgcgcggaaacgctggagtgggtggcctacgggccgtgc
gggcaccgggatgtgtgctccacctgcgtcgtccgcctccgcttcgttatggacgacaag
aagtgctgcatctgcaagaccgtctgcccctccgtcttcgtcaccaaggccttgggtgaa
tacacgagagtggtcaatgatttctctctgtttcccgctggagtaaatgagggcaagaca
ggggatttctggtaccatgaggatacgcaggcatactttgatgacgtggaccactacaag
atgatacgggcaatgtgtcggctttcttgtagtgtttgtgacaatgcagaggatcaggtt
gctcttgctgctcaagcaaagcgcaaaagtaagttcaggagcatcgatcaactaaaggga
catttgttccatgtgcacaggttgcacatgtgcaatctttgcttggaggggcggaaggtg
ttcatttgtgagcagaagctttatttaaggtctcagttaactcagcatatgaaaactggt
gactctgaagtggatggctctgaggtagagcgtagtgggtttgctgggcatccggtgtgc
cagttctgcaaaacttcattttatggagataatgagctttacacacacatgtccagagaa
cactattcttgccacatatgccaacggcagcatcctgcgcagtatgactattttcggaac
tatgatgaccttgagctgcattttcggaaagatcatttcctctgtgaagatgaagcatgt
ttggcaaagaagtttgttgtcttcccgagtgaagcggagctcaagagacataatgcaatg
gagcacggtgggcggatgtctcgtgctcagaggaatgctgcacttcagatacctaccagt
tttatatatcgcagaaatgagcaagaccaacggcgtggcagaggtagggggcgtaatgct
caccatgatggaactgagagtcatatctcatcatctgcgcagaatggccgtgcaactgcc
gatgatggtcatgtgggccgtgttgataatgtttcagggtttttacagtcattaagtgtt
ggttctagttctgcgggagcagaagttagttcaaggactggacgagcactcgaacagttg
tcctttccacctctttcagacccagatattcctgacactagagttgactctgttcctgat
gaaacctcatttccttcgttatcagagcagcaatccagatatgccctggccctcaatcag
agtgcaaggggcactgcaaggcttggggatgagtcattatttcctcctttgcctgggtct
agtaacaacagggctcctgcttcagcacaacaggggctacagagtctagccaagagcaca
cttgcagcaaggcttcaacaacgtagcaagggccctgtgaaggtacttaatactgctcgg
cctcgtccctctgagaatcctgaattgctccctagttccacccagacatggcctacacct
gatcaggggctactcctgtctggatcttctcagcttcgaatgggaactcaaacaagagaa
aatgggttcatgccagctgtcttcagtaattcggcgtggaatcctgttgctccaaacaag
atgaagcactctgtttctactcctaatcttgtgtctggtggctcctctggccaagcgtca
tcaagtacagcttatggtagcaatagaagtcaagaaccgcctcaaggtagccaagctttg
cctgttgcagaggatgtccgtgctgcaaacaaatctctggttgaaagaatgcgttctgct
ctgggaatggatgaagacaggtactctgcattcaaagagattgctggtgaataccgtcaa
ggtatcatagatacttcagagtatctttcatatgtcgaacagtttggactctcgcacctt
gttcctgaaatggctaggctattacctgatcctcaaaagcagagggaactcgctgatgca
tattatacaaacatacgatttaaaagccttcaagaaaatggcggaggtggaactacctca
cacgaggccagtcgtaaaaagaaggggaagggaaaagctcctgttacagaaagcagtgct
gctaaggatgtgaaagatgcactagcagataactttctggacactgtaagaaggcttcaa
tcaaaccaccaggctcaggaaggagaggctgaggtgctgtcaaaggatgggtatcgacct
tctaagggggtccaactatcagctggatcctcatctagtctagacagtgacactggtttc
aattcaaaagcttctggtgccaaagataatgctggcaagggaggaggcaactgtagcagt
aagcaaccaaagaagacatcaaagttcctgagagctcgtttaggtgacaactcattagcc
acacttgatttaagtcgtcctagcgcgagtcctgaacgacctgaaagggaatcacaaggc
ccacagatggggttgcctgttcgaggtgcttggaagaatggtggggggcagaaactcttt
tctagcaatggaaggaagtag
DBGET
integrated database retrieval system