KEGG   Setaria viridis (green foxtail): 117848734
Entry
117848734         CDS       T07951                                 
Name
(RefSeq) RNA-binding protein Y14A
  KO
K12876  RNA-binding protein 8A
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03013  Nucleocytoplasmic transport
svs03015  mRNA surveillance pathway
svs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117848734
  09122 Translation
   03013 Nucleocytoplasmic transport
    117848734
   03015 mRNA surveillance pathway
    117848734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117848734
   03041 Spliceosome [BR:svs03041]
    117848734
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117848734
Spliceosome [BR:svs03041]
 Complex C
  Other components
   EJC/TREX
    117848734
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 117848734
NCBI-ProteinID: XP_034586148
LinkDB
Position
3:3656905..3660142
AA seq 203 aa
MAAVTNADVEVVDFDLDDDDLMDEDAGAEPSPAPAPTSRLRSTIAGDDAPRKTKGRGFRD
DPNSSSAPRDSRFGAGGRGDFDSLGSGGGPAPIRSIEGWIVLVTGVHEEAQEDDLHNAFR
EFGQVRNLHLNLDRRTGFVKGYALIEYENFEEAQAAIKELDGTELYAQIISVDWAFSSGP
AKRRNTQKRPPPRYRSRSPRRTH
NT seq 612 nt   +upstreamnt  +downstreamnt
atggcggccgtgaccaacgccgacgtggaggtggtcgacttcgacctcgacgacgacgac
ctcatggacgaggacgccggggcggagccctcgccggcccccgcccccacgtcccgcctc
cgctccaccatcgcgggcgacgacgcgccgcgtaagaccaagggccgtggcttccgcgac
gaccccaactcctcgtccgccccccgcgactcgcgcttcggcgctgggggacgcggcgat
ttcgactccctcggctccggcggcggcccggcgcccatccgatcaattgaaggatggatt
gtgctggtcactggagttcacgaagaagcacaagaagatgaccttcacaatgctttccga
gaatttgggcaggtcagaaacctgcatttgaacttggatcgtcgtactggatttgtcaag
gggtatgctttgattgaatatgagaactttgaagaagctcaggctgcaataaaagaactg
gatggaactgagctttatgcccaaataataagtgttgattgggcatttagcagtggtcct
gctaagcgcagaaacactcaaaagagaccaccaccaagatatcgttcaaggtcccccagg
aggacacactga

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