Setaria viridis (green foxtail): 117848747
Help
Entry
117848747 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K17925
sorting nexin-13
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
svs04990
]
117848747
Domain-containing proteins not elsewhere classified [BR:
svs04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117848747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
117848747
NCBI-ProteinID:
XP_034586161
LinkDB
All DBs
Position
3:complement(8870622..8878593)
Genome browser
AA seq
1129 aa
AA seq
DB search
MATTAAGAPRAQTLRDLADEGKKRAVLLLVFAFGLAFLMSLTSSSVWFNLPFATALIILF
RYISLDYDLRRKSTTNTDQDISRPLIKTRSTELKKVLLTENDGKSNWRSKVNSPPVEAAF
EQFSRHLVTEWVTDLWYSRVTPDKEGPEELITIVNTVLGEISVRARNVNLISLLTRDLVD
LICNSLELYHFCQAKIGKEKFVNLPSEHRDAELKMALLAENKLHPALFSANAEYRVLQSL
ADGLISITVKPQDLQCTFFRCTARELLACAVLRPVMNLVNPRFINERIESLALSRANKLE
KGVEESMVDATTVKQKEASMPSIDEFSASIDHSSPGVELVPFHQGQSKMASDMQPSKSKN
SSSLKPESSNASLIGTSHPLESTSLHSTSHVASGNGFSLHSKSSDIASTDSHGRERAQPL
GISSQRTHQALALEHLENMWTKGKNYKSENAKHNANIPVGSDSLGSTSSGQQSVPCCTSI
SQSQALFSQSEDQRLVRHSTTPAYSNGTNHLPKSLSADMAEHAGPEDFGVESESSYATED
DDVNNVTGLDSPVTRVWESKSKGNATSSHIHHPLESSSFHRAKKNRSHVGKLKMSRTSSG
RKRSRSYAQKPPIWQEERSSFTVGDDLDILNASANDSKTDELVEDTEVESMARMFSSANA
SIYSLASTDSSYSSNYGGANVLQDSYLKLRCEVVGASIVKSGSGMFAVYSISVTDANGNS
WSIKRRFRHFEELHRRLKEYAQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKNLLQIP
IVSSCIEVWDFLSVDSQTYIFMDSLSVIQTLSVGLDERSNGKSRKVLNSSGALNGSFISG
GQSFHGHTDNTVHKDLDFAVSDGLRYRKGNVEKNLGNSVCDTTTNLYLDNSGSDPEQNDY
SFSIDSVNPKKMRSSETNETPQLLGSDGFSVSPNDWMAPNLSVPLFHLVDVVFQLQDGGW
IRRQAFWVAKQLLQLGMGDTFDDWLVDKIQLLRKGRIIAFAVKRVEQILWPDGIFMTKHP
NRKTSPPPSGEQNNVVGNYLSDEQRLEAARRANFVRELIIDKAPSPLVSLVGRKDYEKCA
QDIYFFLQSPVCLKQLAFELLELLVLAAFPELDGTVRKWHEDKQRFGAQ
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggccgcgggcgcgccgagagcgcagacgctgcgcgacctcgcggatgag
gggaagaagcgggccgtcctgctcctcgtcttcgccttcggcctcgctttcctcatgtcc
ctgacgagctcgtcagtatggtttaacctgccatttgccacagctctgattattttattt
cgctatatatcacttgactatgacctccgtagaaagagcacaactaatacagatcaggac
atcagtcgtccacttataaaaacgagaagtactgagttaaagaaagtccttctgactgaa
aatgatggaaaatctaattggaggagcaaggttaattcacctccagttgaagcagcattt
gaacagttttcaaggcaccttgtcacagaatgggtaacagatctgtggtactcccgtgta
acacctgacaaggaaggtccagaggaactcatcaccatagttaatactgtccttggggag
atttcagttcgggcaagaaatgttaaccttatcagtttgctaaccagagatctggttgat
cttatatgcaatagtttggaactttatcatttctgtcaagccaagattggaaaagagaag
tttgtgaacctgccatcagagcatcgtgatgctgaactgaaaatggcccttctggccgaa
aacaagttgcatcctgctctattttcagccaatgccgaatacagggtattgcaaagcctt
gctgatggtttgatctcaatcacagtgaagcctcaggatctacagtgtaccttcttccgg
tgcacagcgcgagaacttctcgcttgtgcagttttgagacctgtcatgaacttagtaaat
ccaaggtttataaatgaaagaattgaatcattggctctttcacgtgctaataagttggag
aaaggagttgaagaatccatggtggatgctacaactgttaagcaaaaggaggcttctatg
ccttctatagatgaattttctgcatcaatagatcactcgagtccaggtgttgaactggtt
ccatttcatcagggtcagtccaaaatggcatcagatatgcaacccagcaaaagtaaaaat
tcatctagtctaaaaccagaatccagtaatgcttctttgatcggtacttcacatccactt
gagtcaacaagtttacattccacttcccatgttgcttcgggtaatggtttttctttacat
tccaaaagcagtgacatagcatccacagatagtcatgggagagaacgtgcacagcccttg
ggtatcagctcccaacgaacacatcaagctctagcacttgagcaccttgagaatatgtgg
acaaagggaaagaattacaaatcagaaaatgcaaaacataatgcgaatatacctgttgga
tctgattctctaggttcgacttcttcagggcagcagtcggttccctgctgcacttcaatt
tctcaaagtcaagcactgttctctcaatctgaggaccagcgcttggtaagacactcaact
acacctgcatattcaaatggcaccaaccacctgccgaaaagcttatctgcagacatggca
gaacatgctggcccagaagactttggagtagagagtgagagttcatacgccactgaagac
gatgacgtcaacaatgtgactggacttgattctcctgttacccgagtttgggagagcaaa
agcaaaggaaatgccacctcatcacatatacatcacccacttgagtcttctagtttccat
agagcaaagaagaatagaagtcatgtcggaaaactgaaaatgtcaagaacttcttcagga
agaaaaaggtctaggtcatatgctcaaaagcctcccatctggcaagaagaaagatcctcg
ttcacggttggggatgatttggacatactaaatgcatctgcaaatgattcaaagacagat
gaattagttgaggatactgaggtggaaagtatggctaggatgtttagtagtgcaaatgct
tcaatttattcattggcatcaactgactcttcttattcttcgaattatggcggtgccaat
gtgctacaagattcttatctgaagttaagatgcgaggtggtaggagctagcattgtgaaa
agtgggtctggcatgtttgctgtgtattctatttccgtgactgacgccaatggtaatagt
tggtccatcaagaggaggtttcgtcattttgaagagctgcatcgacgtctgaaagagtat
gctcagtacaatcttcatttacctccaaaacattttctttcatcaggtttagaggttcct
gttgttcgagagagatgcaagctgcttgacatatatctgaagaacctccttcaaattcct
attgtttcaagctgcatagaagtctgggattttctcagtgtggactcacagacatatatt
ttcatggactctctctcagttatccagacattgtcagtcggtttagatgaaagatcaaat
gggaagagtagaaaagtattgaattcttctggagctttgaatggaagttttatttctgga
ggtcaatctttccatggacatacagataataccgtgcataaggatttggactttgctgtc
agtgatggtttgagatataggaaagggaatgtggaaaagaacttaggaaatagtgtttgt
gacacaactaccaatctttatctagataattctggaagtgacccggagcagaatgattat
tcgttttcaatagattcagtaaatcctaagaagatgcgttcaagtgaaaccaatgagaca
cctcaacttttgggatctgatggattctctgtatctcctaatgattggatggccccaaat
cttagtgtccccttgtttcatcttgttgatgtggtttttcagctccaagatggaggctgg
atcaggcgtcaagcattttgggtagcaaagcaactactgcagttgggaatgggagacaca
tttgatgactggcttgttgacaaaatccaattacttaggaaaggaaggataattgctttc
gctgttaagcgggttgaacaaattctctggcctgatggaattttcatgacaaaacatcca
aatagaaaaacgtcaccaccaccttctggtgaacagaacaatgttgtgggcaactatcta
agtgatgaacaacggctagaagctgctcgtcgtgcaaattttgtccgtgaattaataata
gataaagcaccatctccactagtgagtctggttggccgaaaggattatgaaaaatgtgct
caggatatctacttctttcttcagtccccggtttgtttgaagcagctagcatttgagctc
ctagagctgcttgttctagccgcgttcccagagttggatggcactgtgagaaagtggcat
gaagataaacagcggttcggcgcccagtaa
DBGET
integrated database retrieval system