Setaria viridis (green foxtail): 117848778
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Entry
117848778 CDS
T07951
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00061
Fatty acid biosynthesis
svs00071
Fatty acid degradation
svs01100
Metabolic pathways
svs01212
Fatty acid metabolism
svs04146
Peroxisome
Module
svs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117848778
00071 Fatty acid degradation
117848778
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117848778
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svs01004
]
117848778
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117848778
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117848778
Lipid biosynthesis proteins [BR:
svs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117848778
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of breast milk
117848778
Exosomal proteins of breast cancer cells
117848778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Malic_M
Motif
Other DBs
NCBI-GeneID:
117848778
NCBI-ProteinID:
XP_034586205
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Position
3:complement(3293117..3298743)
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AA seq
657 aa
AA seq
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MVPLSAYIVKRHLFFLSSTRHQCELLLNSVQELCLLQLPCLVAADKYPNNRMLGWRPLKD
GVPGPYLWKSYKEVYDEVLQIGSALQELGVQPGSRIGIYGTNCPQWIVAMQACNGYSLIC
VPLYDTLGAGAVDYIIDHAEIDVVFIQDKKIKEILSPNCKSAKRLKALVAFTSATREQIK
EADQIGMKMYSWNEFLKVGKVNPRQPCPPQANDLCTIMYTSGTSGQPKGVMLTHESHAMY
VKGVDLFMDQFDDKMTTDDVFLSFLPLAHILDRMIEEYFFHKGASIGYYHGDLNALRDDI
QELKPTLLVGVPRVYERIYEGILKAIAELRPLRRVIFNALYNRKLTSMKSGYSHKTASPF
ADMLAFRKVKARLGGRLRLLISGGAPLSTEIEEFLRVTTCAYFIQGYGLTETLGPSTVCY
IDDMALVGSVGVPATYTEIRLEEVPEMGYDPLGVPSRGEICIRGKSLFAGYYKNPELTNE
AIVDGWFHTGDIGEMTPDGILKVIDRKKNIFKLSQGEYVAVEYLEKVYGFPPLVEDIWVY
GDSFRSNLVAVVNPHEENTMKWAESNGYKGSFGEICKLEGLKEYILKELTAVAQKNKLRG
FEYIKGIVLDPLPFDIERDLVTATMKKRRNNMLKYYQSDIDAVYKKLEAQKNAAKAK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccctctctgcatatatagtaaagagacatctcttcttcctctcatccacaaga
catcagtgcgagcttcttctcaattcagtccaagagctctgtctcctccagctcccctgt
ctggtcgcagcagacaagtatcccaacaaccggatgcttggatggcgtccgcttaaagat
ggagtgccagggccctatttgtggaaatcatacaaggaggtctacgatgaagtgctgcaa
attggctctgctttgcaagagctcggagtgcaaccaggttccaggatcggaatctatgga
accaactgccctcagtggatagtggcaatgcaggcttgcaatggctacagtctaatctgt
gtcccactgtacgatactttaggtgcaggagctgttgactacattattgatcatgctgag
attgatgttgtcttcatacaggacaagaaaataaaagagatactatccccaaattgcaag
tctgctaagaggctaaaagcattggtggcattcacttcggcaacaagggaacagatcaaa
gaagcagatcagattgggatgaaaatgtactcctggaatgaattcttaaaagtgggaaaa
gttaatcctcgtcaaccttgccctccgcaagcaaatgatttatgtactatcatgtataca
agtggaacaagcggacagccaaaaggtgttatgctaacccatgaaagccatgccatgtat
gtaaaaggagtggacctctttatggatcagtttgatgacaagatgacaacagatgatgtc
tttctatccttcctcccacttgctcacattcttgaccgcatgatcgaagagtatttcttt
cacaaaggagcctcaattggctattaccacggggatttgaatgccttaagggatgatatc
caggagctaaagccaactctactagttggggtaccccgagtgtacgaaagaatttatgaa
ggtatcttaaaagccattgcggaactcagaccacttagaagggtgatttttaatgctttg
tacaaccgcaaactgacaagcatgaaatcaggctactcacacaaaactgcttcacctttt
gcggacatgctggcttttcgcaaggtcaaggcgaggcttggaggtcgtcttcgcttatta
atctcaggaggggctccattaagtactgagattgaagagttcttgagagtgaccacatgt
gcatactttatccaaggatatggtttaacagaaacactgggacctagcacagtctgctac
attgatgacatggccctggttggaagtgttggcgtacctgccacctacactgaaatacga
ctggaagaagtacctgagatgggctatgatccacttggtgtcccttcacgtggtgaaatc
tgcattcgagggaagtctctctttgctgggtactacaaaaatcctgagctcacaaacgaa
gccatagttgatggatggtttcatacaggcgacattggagagatgaccccggatggaatc
ttgaaggtaattgaccgaaaaaagaacatatttaagttgtcacagggggaatatgttgca
gttgagtacctcgagaaagtatatggcttcccaccacttgttgaagatatctgggtatat
ggggacagcttcagatcaaatttagttgcagtagtcaatccacatgaagaaaacacgatg
aagtgggcagagtccaacggctacaaggggtctttcggtgaaatctgcaaacttgaaggc
cttaaggagtacatcctgaaagagctgacagctgttgcacagaagaacaagctacgaggt
ttcgagtacatcaaaggcatagtgttggatcctctaccttttgacatcgaaagggatttg
gtaactgcaacaatgaagaagagaagaaacaatatgctgaaatattaccagtccgacatt
gatgcagtatacaaaaagctcgaggcacagaagaatgctgccaaagctaagtga
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