Setaria viridis (green foxtail): 117848821
Help
Entry
117848821 CDS
T07951
Name
(RefSeq) stromal 70 kDa heat shock-related protein, chloroplastic
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
svs04141
Protein processing in endoplasmic reticulum
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117848821
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117848821
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117848821
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117848821
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117848821
03009 Ribosome biogenesis [BR:
svs03009
]
117848821
03110 Chaperones and folding catalysts [BR:
svs03110
]
117848821
04131 Membrane trafficking [BR:
svs04131
]
117848821
03051 Proteasome [BR:
svs03051
]
117848821
03029 Mitochondrial biogenesis [BR:
svs03029
]
117848821
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117848821
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
117848821
Spliceosome [BR:
svs03041
]
Complex B
Other components
Prp19 complex
117848821
Complex C
Prp19-CDC5 complex
117848821
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117848821
Chaperones and folding catalysts [BR:
svs03110
]
Heat shock proteins
HSP70 / DNAK
117848821
Membrane trafficking [BR:
svs04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
117848821
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
117848821
Proteasome [BR:
svs03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
117848821
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
117848821
Exosome [BR:
svs04147
]
Exosomal proteins
Proteins found in most exosomes
117848821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
Hydantoinase_A
FtsA
DUF5610
Motif
Other DBs
NCBI-GeneID:
117848821
NCBI-ProteinID:
XP_034586264
LinkDB
All DBs
Position
3:complement(5725739..5730834)
Genome browser
AA seq
702 aa
AA seq
DB search
MASFTCSQVGAAAAGGASPFLFSRRRGSGPAPPSSPFVGRRLAAAVRMRAPSRGPRGGAA
LRVTCEKVVGIDLGTTNSAVAAMEGGKPTVVTNAEGARTTPSVVAYTKTGERLVGQIAKR
QAVVNPENTFFSVKRFIGRKMSEVDDEAKQVSYGVVKDENGNVKLDCPAIGKQFAAEEIS
AQVLRKLVDDASKFLNEKITKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAAS
LAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLA
SNFKKDEGIDLLKDKQALQRLTEAAEKAKMELSTLTQANISLPFITATADGPKHIEATLS
RAKFEELCSDLIDRLKTPVNNALKDAKLSVSDLDEVILVGGSTRIPAVQELVRKLTDKDP
NVTVNPDEVVSLGAAVQGGVLAGDVKDVVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTS
KSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDAN
GILSVAAIDKGTGKKQDITITGASTLPKDEVERMVEEADKFAKEDKEKRDAIDTKNQADS
VVYQTEKQLKELGDKVPAPVKEKVDVKLQELKDAISGGSTQGMKDAMAALNQEVMQIGQA
MYNQPGAAGSTPDAEAGPTPGAGPAKGPNDGDVIDADFTDSN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttcacctgctcccaggtcggcgcggcggccgcgggcggcgcctcgcccttc
ctcttctcccggcggcgggggagcgggcccgccccgccgagctcccccttcgtgggccgg
cggctggcggcggcggtgcggatgcgcgcaccctcccgcggcccccgcgggggcgccgcg
ctccgggtcacctgcgagaaggtggtggggatcgacctgggcaccaccaactccgccgtc
gcggccatggagggcggcaagcccaccgtcgtcaccaacgccgagggggcgcgcaccacg
ccctccgtcgtcgcctacaccaagaccggggagcggctcgtcggccagatcgccaagcgc
caggccgtcgtgaaccccgagaacaccttcttctccgtcaagcgattcatcgggcgcaag
atgtccgaggtcgacgacgaggccaagcaggtttcctacggcgtcgtcaaggacgagaac
ggcaacgtcaagctcgactgccccgccatcggcaaacagttcgctgcagaggagatttcc
gcgcaggttttgcggaagttggtggatgatgcatctaagtttcttaatgagaaaattaca
aaagcagtggttactgtcccagcatacttcaacgattcacaaaggacagcaacaaaagat
gctggtcgtattgcagggctggaagttcttcgtattataaatgaaccaactgctgcatca
ttggcgtatggtttcgagaagaaaaataatgaaacaattctagtgtttgacttgggaggc
ggtacctttgatgtatctgtattggaggttggagatggtgtatttgaggtgctttccaca
tcaggtgacacccaccttggtggtgatgactttgataagagaatagtagattggctagct
agcaactttaagaaagatgaaggcattgatcttctgaaggataaacaagcccttcagcgg
cttactgaggcagcagagaaggctaagatggaactgtcaacgctcacacaggccaacatt
agcttgccattcattactgctactgctgatgggccgaaacacattgaggcaaccctctcg
agagccaaatttgaggaactatgttcagaccttatcgacaggcttaaaactcctgtcaat
aatgctttgaaagatgccaagttgtcggtcagtgatctagatgaagtgattcttgtgggt
ggatccacacgaatccctgcagtgcaagaacttgtgaggaagcttactgacaaggatccc
aatgttacggtcaaccctgatgaggttgtttctcttggggcagctgtgcagggtggggtt
ttggctggagatgtgaaagatgtcgttcttctggatgttactccattatctcttggtttg
gagacattgggtggagtgatgacaaagattatccccaggaataccacactgcccacctca
aaatcagaggtattctcaacagctgcagatggacagacgagtgttgagatcaatgttctc
cagggagagagagagtttgtcagggacaacaagtctcttggaagcttccggttggatggg
attcctcctgcacctcgtggtgtcccacaaattgaagtgaagtttgatattgatgcaaat
ggtattctctcagttgctgcgattgataagggcactggaaagaaacaggatatcaccatt
actggcgctagtacgctacctaaggatgaggttgagagaatggtagaagaggctgacaag
tttgccaaggaggataaggagaagagagatgccattgacaccaaaaaccaggcagactct
gtggtctaccagaccgagaagcagctgaaggagctcggcgacaaagtccctgctcctgtg
aaagagaaggtggatgtgaagctccaggagctcaaagacgccatttctggtggatcaaca
cagggcatgaaggacgccatggctgctttgaaccaggaggtgatgcagatcgggcaggca
atgtacaaccagcctggtgcagctggatctacccctgatgctgaggccgggcctacgcct
ggtgctggacctgcgaagggacccaatgatggggatgtcattgatgcggacttcacagat
agtaactga
DBGET
integrated database retrieval system
