KEGG   Setaria viridis (green foxtail): 117848860
Entry
117848860         CDS       T07951                                 
Name
(RefSeq) small ribosomal subunit protein RACK1z
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
svs  Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:svs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117848860
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svs04147]
    117848860
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     117848860
Exosome [BR:svs04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117848860
  Exosomal proteins of colorectal cancer cells
   117848860
  Exosomal proteins of bladder cancer cells
   117848860
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_DCAF4 PROPPIN Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Ge1_WD40 eIF2A WD40_RFWD3 Beta-prop_NUP159_NUP214 Cytochrom_D1
Other DBs
NCBI-GeneID: 117848860
NCBI-ProteinID: XP_034586318
LinkDB
Position
3:10956909..10959204
AA seq 334 aa
MASGQESLSLVGTMRGHNGEVTAIATPIDNSPFIVSSSRDKSVLVWDLTNPVHSTPDSGA
AADYGVPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGLTTRRFVGHEKDV
ISVAFSVDNRQIVSASRDKTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFAP
TIVSGSWDRTVKVWNLTNCKLRCTLDGHGGYVNAVAVSPDGSLCASGGKDGYTLLWDLTE
GKRLYSLDAGSIIHSLCFSPNRYWLCAATQDSVKIWDLESKHVVQDLKPDIQISKNQILY
CTSLSWSADGSTLYTGYTDGSIRVWKISGFGYAG
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggccagcgggcaggagtcgctctcccttgtgggcacgatgcgcggccacaacggagag
gtgacggcgatcgcgaccccgatcgacaactcgccgttcatcgtctcgtcctcccgcgac
aagtccgtgctggtgtgggacctgaccaacccggtccactccaccccggactccggcgcg
gccgccgactacggcgtccccttccgccgcctcaccggccactcccacttcgtccaggac
gtcgtcctcagctccgacggtcagttcgcgctgtccggctcctgggacggcgagctccgc
ctctgggatctctccaccggcctcaccacccgccgcttcgtcggccacgagaaggacgtc
atctccgtcgccttctccgtcgacaaccgccagatcgtctccgcgtcccgcgacaagacc
atcaagctctggaacaccctcggtgagtgcaagtacaccattggcggcgacctcggcggc
ggcgagggccacaacggctgggtctcctgcgtcaggttctcacccaacaccttcgcgccc
actattgtctccggctcctgggaccgcaccgtcaaggtctggaaccttaccaactgcaag
ctgcgctgcaccctcgatggccacggcggctatgtcaacgccgtcgccgtgagccctgac
gggtccctgtgcgcctccggcgggaaggacggctatactctgctgtgggatttgactgag
gggaagaggctgtactcactggacgcaggctccatcatccactcactctgcttctcgccc
aaccgctactggctctgtgctgctacccaggactctgtcaagatctgggaccttgagtcg
aagcacgtcgtgcaggacctcaagcccgacatccagatctccaagaaccagatcctgtac
tgcacaagcttgagctggagcgcggatggaagcaccctctacactggctacaccgatgga
tctatcagggtctggaagatctctgggttcggctatgcaggctag

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