Setaria viridis (green foxtail): 117848868
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Entry
117848868 CDS
T07951
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117848868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117848868
Spliceosome [BR:
svs03041
]
Common components
Common spliceosomal components
SR proteins
117848868
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117848868
NCBI-ProteinID:
XP_034586332
LinkDB
All DBs
Position
3:complement(23187790..23191965)
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AA seq
279 aa
AA seq
DB search
MTRRNGCTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPRDAED
AIYGRDGYNFDGHRLRVELAHGGRGPSFDRSSSHNSVGRRGATRRSDYRVMVTGLPSSAS
WQDLKDHMRRAGDVCFSDVYREAGATIGIADYTNYEDMKHAIRKLDESEFRNAFSRSYIR
VREYDARRSRSRSRGRSHSRSKSRSRSRGRSYSRSRSHSYSRSRSPRSRSASQSRSPVKA
RSPSRSQSPRASPPRDKSASRSPARSKSLPRSDSPAKAE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcggaacggctgcacgatctacgtgggcaatctccccggtgacatccgcgag
agggaagtagaggatctcttctacaagtatggccgtatcgtggaaattgacctgaaaatt
cctccaaggcctcctggttttgcttttgttgagtttgaggacccacgtgatgctgaagat
gcaatttatggtcgtgatggatacaattttgatggccataggttgcgggtggaattagct
catggtggaagaggcccatcttttgatcgatcaagcagccataatagtgttggacgccgc
ggtgcaactaggcgatctgattaccgcgttatggttactggactaccttcttcagcatca
tggcaagatctcaaggatcatatgcggcgagctggtgatgtctgtttctccgatgtttat
cgtgaggctggagctactattggaatagctgattataccaactatgaagatatgaaacat
gcgataaggaaacttgatgagtccgagttccgtaatgcattttcacggtcatatatcagg
gtgagggagtatgatgcgaggcgcagccgctctcgctccagaggcagaagccatagccgc
tctaagtcaagaagcagaagccgcggacgctcttactcgagaagcagaagccacagttat
agcaggagcaggagcccaagatcgagatctgcttctcagtcacgatcacctgttaaagca
agatcaccatccagatcccagtcacctcgtgcttctcctccgcgcgacaagtccgctagc
aggagccctgccaggagcaaaagtctgccccgatctgattctcccgcaaaagctgagtga
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