Setaria viridis (green foxtail): 117848915
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Entry
117848915 CDS
T07951
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117848915
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117848915
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_28
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_15
AAA_24
AAA_30
Motif
Other DBs
NCBI-GeneID:
117848915
NCBI-ProteinID:
XP_034586394
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Position
3:complement(38591403..38595134)
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AA seq
597 aa
AA seq
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MVSEASKKKAAQKKAAAAAKRGGKAAAASSSSSSSSAAAAAEKAANGVAALKLSDRTCTG
VLASHPLSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRE
LPIPEHMDIYHLSHEIEASDMSALQAVVSCDEERVQLEKEAEILAAQDDGGGEALDRVYE
RLDAMDAATAEKRAAEILFGLGFSKQMQAKKTKDFSGGWRMRIALARALFMNPTILLLDE
PTNHLDLEACVWLEEMLKNFDRILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYV
QTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VVRDKVLVFRFTDVGKLPPPVLQFVEVKFGYTPDNLIYKCLDFGVDLDSRIALVGPNGAG
KSTLLKLMTGDLVPLDGMVRRHNHLRIAQYHQHLAEKLDLDMSALAYMMKEYPGTEEEKM
RSAVGRFGLSGKAQVMPMKNLSDGQRSRVIFAWLAYRQPQLLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAQEIWVCENQAVTRWEGDIMDFKAHLKSKAGLSD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggaggccagcaagaagaaggccgcccagaagaaggccgccgcggccgccaag
aggggaggcaaggcagcggcggcgtcctcgtcctcgtcttcttcctccgcggccgcggcc
gcggagaaggcggcgaacggcgtcgcggcgctcaagctctccgaccgcacctgcaccggg
gtcctcgcgtcccacccgctctcccgcgatatccacatagagtctctttcattaacattc
catgggcatgaccttattgtggattctgagttggagctcaactatgggaggcgatacggg
ttgcttggcttgaatggctgtggaaaatctactcttctcacagcaataggctgcagagaa
cttcctatccctgaacatatggacatataccatctcagccatgagattgaggcttcagat
atgtctgcactacaagctgttgttagttgtgatgaagaaagagtccagttggaaaaggaa
gctgaaattttggctgcgcaggatgatggtggtggtgaagctttggatcgtgtgtatgag
cgtctagatgcaatggatgccgcaactgcagaaaagcgggctgctgaaatattatttggt
ttggggttttccaaacagatgcaggcaaagaaaactaaagatttctctggtggttggcgt
atgagaattgctttggcaagggcactgttcatgaatccaacaatccttttgcttgatgag
ccaacaaaccatcttgatcttgaggcatgtgtctggttggaagagatgctaaagaatttt
gaccgtatacttgttgtcatatcacactctcaagattttctaaatggagtgtgcacaaac
atcatccatatgcaaaacaagaagctcaagttatacactggtaattatgatcaatatgtc
caaacccgctctgagcttgaagagaatcaaatgaagcagtacaagtgggagcaggaacag
attgcatcaatgaaggagtacattgcccgctttggtcatggttctgcgaagcttgcacgt
caggcacagagcaaagagaaaactcttgcaaagatggagcgtggtggtctcactgagaag
gttgttagggacaaagtacttgtgttccgctttacagatgttggcaagcttccgccacca
gtgctgcagtttgttgaagtcaagtttggatatacacctgataatctcatatacaagtgt
cttgactttggtgttgatcttgactctagaattgcattggttggtcccaatggggcaggg
aagagcactcttctgaagctcatgactggtgatctagttccactagatggcatggtgagg
cgccacaatcacctccgcattgcgcagtaccatcagcatcttgcagagaagctggacctg
gacatgtcggctctggcttacatgatgaaggaataccctgggactgaagaagagaagatg
agatctgcagtcggcaggtttggcctgtcagggaaggcgcaggtgatgccgatgaagaat
ctctccgacgggcagaggagccgtgtcatctttgcatggctggcctacaggcagccacaa
ctgctgctgcttgatgagcctactaaccatcttgatattgagaccatcgactccctggca
gaggcgctgaacgagtgggatggtggtttggtcctggtgagccatgacttccggctgatc
aaccaggttgctcaagagatctgggtgtgtgagaaccaggcagtgactaggtgggaaggt
gatatcatggatttcaaggcacacttgaagagcaaggctggtctatccgattag
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