Setaria viridis (green foxtail): 117848931
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Entry
117848931 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
svs03037
]
117848931
Cilium and associated proteins [BR:
svs03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117848931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
Motif
Other DBs
NCBI-GeneID:
117848931
NCBI-ProteinID:
XP_034586409
LinkDB
All DBs
Position
3:49753826..49763214
Genome browser
AA seq
1617 aa
AA seq
DB search
MDNDNGDTDDLGSGWFEVKKKHRSSSKYTLQRSSGGSSQKIPNSSSRSRPNCSSDSSRWH
DRPQHPPPNINANVGADESGTGETTNVLAERCNDVGASDLKGVLNTSASEYVAERPDELL
VAEETSEPPKTSLADHANPSVPHESSTCSGSVAKCADDSQHVKCSPKTESLGVLSNTPVK
FGDFDEVPGLSLPSDSYRDNSSSRDHGHGGDAAHSRNEQKDESKPKVETNSCATIDEASP
IIIQGTETPSDDTIGPLDAHETPESMLNVSGSAASTDSVSLPCSSNDHEVPVTSSSVAST
ESRTLLPNHAPASADFGSETAESKERFRQRLWCFLFENLNRAVDELYLLCELECDMEQIN
ESILVLEEAISDFQELKSRAEHFDNTKKSPGVPKEGMPMAVKADHRRPHALSWEVRRMTS
SPHRQEILSSSLEAFQRIQLELACKQAGITAERFTSSSSGEVLSSSSELTTASATVRNIS
LKVESQVKLPDSGSEKKIAGEKQIRDAFKSDKSHPQSMPSYSARSRRGSLEPISEIEKHT
FKNDRELPENKFDRLKSADVVKKSTVHLEKEKQITAPWKSMDAWKEKRNWEDILKSPARS
SRVSHSPGVGRKVTDRGRVLHDKLMSPEKKKRSALDMKKEAEEKHARALRIRSQLESERV
QRLQRTSEKLNRVNEWQAVRSSKLREVMNARHQRGESRHEAYLAQVAKRAGDESTKVNEV
RFITSLNEENKKFLLRQKLYDSEMRRAEKLQVIKTKQKEDTAREEAVLERRKFLEAEKMQ
RLAEIQRKKEEAIFRREEERKASSAAREARAAEQQRRKEIRAKAQQEEAELLAQKLAEKL
RESEQRRKYHLEQIRERASMDLRDQTSPFQRRFPSKDGQNRSTNSGEDSQITGNSSTADS
VVKSSNNVQMKRRIKKIRQRLMALKHEFIEPPIGESTGITHRAALGAAKAKLSRWLQDLQ
KLRQARKEGTASIGLIVGDMTKYLEGKDLELHASRQVGLLGFIASALPASHTSKPGACQV
TVYLLRLLRVLLSLPANRTYFLVQNLLPPIIPMLSASLENYIKVAASNSGSSNLLPNKTS
TENTESSGEVLDGFLWTVTMIVGHVHLDDEQLQMQGGLIELIVAYQIIHRLRDLFALYDR
PQVEGSPLPSSIRFGLNLLAVLTSKPGNFSTIDWESCKCRTLGGTIVQEYEYLSSQDSMG
NQLMTLEQSGDNKLASLCSELPEENKSCKLHDLSIPGDRKLVDEARKDLIPVSGGLNNPA
MQPPDLGIATEKRSEIPSQGDENSTIDSFLEGRKVNNVGSGYNSSPGKGNETSLKHPVML
LLSAMTETGLVSLPSLLTAVLLQANNRSSSEQTSAILPSNFEEVATGVLKVLNNVARLDI
NLLQCMLARSDLKMEFFHLISFLLSHCMNKWRVPNDQVGLLLLESLLLLGYFSLFHAENQ
AVLRWGKSPTILHKLCDLPFVFFSDPELMPILAAALIAVCYGCDQNRSVVQQEISTDMLR
SLLKSCQTSLTSPDSIAVDGSGNNSSDNTQSLLDTRSPQGDIPIRSSRKIGRPVVGKGVS
GGIRFNRNRVQKDGRGRGVDDGPLKQRAGEASSNFMLHRKIPASFLDRAEEFFCSET
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggataatgataatggagatacggatgaccttggatcaggatggtttgaagtgaaaaag
aagcatcggtccagctcgaaatacacattgcagaggtcttctggaggttccagccagaaa
attccaaactcgtcgtcacggtcacggcccaactgtagcagtgacagttcaaggtggcat
gacaggccgcaacatcctcctccgaacataaatgctaatgttggcgctgatgaatctggt
actggagaaacaactaatgttctagctgaaagatgcaatgatgtaggtgctagtgacctg
aagggtgtcttaaatacttcagcctcagagtatgtagcagaaagacctgacgagctgctg
gtggctgaagaaacaagtgaacctcccaaaaccagtctggctgatcatgcaaatccttca
gtgcctcatgagtcctcgacctgttcaggcagtgttgccaaatgtgcagacgattctcag
catgtaaaatgttctccaaaaacagagtcgctaggtgttttgtccaatactcctgtcaag
tttggagactttgatgaagttccaggtttatcattaccctctgattcatacagagataac
agttcttctagagaccatgggcatggtggagatgctgcacattccagaaatgagcaaaag
gatgaaagtaaacccaaagtggagacgaactcttgtgcaacaattgatgaggcatctcca
atcattatacaaggaacagagacacctagtgatgacacgatagggccactggatgcacat
gaaacaccagaaagtatgttgaatgttagtggttcagcagcctcaactgactctgtttcc
ctaccctgctccagtaatgatcatgaagttccagttacatcttcatctgttgcgtccaca
gaaagtagaacgttacttcctaaccatgcaccagcttctgcagatttcggatctgaaact
gctgagagcaaagaaagattcaggcagaggctatggtgctttctttttgagaatctgaat
agggctgttgatgaactttacctcctctgtgaactagaatgtgacatggaacaaattaat
gaatccatacttgttcttgaagaagctatatctgattttcaagaacttaaatccagagca
gagcattttgataacaccaaaaagtctcctggtgtacccaaagaggggatgccaatggct
gtgaaagctgaccataggagacctcatgccttgtcttgggaggtcagaaggatgacaagt
tcaccacacaggcaagaaatactctcttcatctctagaggccttccaaaggatccaattg
gaactggcatgcaagcaggctggtataacggcagagagatttacatccagctcttctgga
gaagttttgagtagctcatcagagctgaccacagcatccgctactgttaggaatataagt
ttgaaagtggagagtcaggtaaaacttcctgatagtggtagtgagaaaaagattgctgga
gagaagcaaatcagggatgcattcaagtcagataaatcacatccacaaagtatgccttca
tattctgcaaggagtagaagagggtcactagaaccgatctcggaaatagagaagcacact
tttaagaatgacagggagttgccagaaaacaaatttgacaggctcaagtcagccgatgtt
gttaaaaagagtacagttcatcttgaaaaggagaagcaaattacagcaccttggaagtca
atggatgcttggaaggagaaaaggaactgggaagatatattgaaatctcctgcacggagt
tctcgggtttctcattctcctggtgttggcagaaaagttacagatcgtggtcgtgttcta
catgacaagttgatgtctcctgaaaagaaaaaaagaagcgctttggatatgaaaaaagaa
gcagaagaaaagcatgcacgagcactgcgaattaggagtcaactagaaagtgagagggtt
cagaggctacaacgtacctctgaaaagttaaatcgtgtcaatgagtggcaggctgtgcgc
agctcaaaactgcgggaagtaatgaatgcacgccatcaacgtggtgaatctcgtcatgaa
gcatatcttgctcaggttgcaaaaagagctggtgatgagagtactaaagtaaatgaggtc
cgttttattacatcgctgaatgaggaaaacaaaaaattcttgctgaggcagaaactttat
gattctgaaatgcggagagctgaaaagctacaggtgatcaaaacaaagcaaaaggaggac
actgctagggaagaagctgttttggaacgaagaaagttccttgaagctgagaagatgcag
cgccttgctgaaatacagcgcaagaaagaagaggctattttcagaagagaagaagagcgc
aaagcatctagtgctgcacgggaagcaagggctgcagaacagcagcgtagaaaagaaata
agagcaaaagcgcaacaagaggaagctgaacttttagcccaaaagttagctgaaaagctc
cgtgagagtgagcagcgccgcaagtatcacctagagcagatacgggagcgagcctctatg
gatcttagggatcagacttcaccttttcagcgccgctttccaagtaaagatggccaaaac
cgttcaactaatagcggcgaagactctcagattactggcaattccagcaccgcagactct
gtggttaaatcatcgaataatgtacagatgaaacgaaggatcaaaaagattcgccagaga
ttaatggctctgaagcatgaatttatcgaaccacccataggtgaaagtactggaatcaca
cacagggctgctctaggagctgccaaagctaagttaagtagatggcttcaagacctacag
aaacttcgtcaagctagaaaagaaggcactgccagtattggtttgattgtcggtgacatg
acaaagtatttagaaggaaaggatcttgaactgcatgcatcaagacaagttggtctgctt
ggcttcattgcatctgctttacctgcatcacacacttcaaagcctggagcttgtcaagtc
actgtctacctcttgcgcctgttgagagtattgctctcacttccagctaatcgaacatat
tttctagtacagaatcttttacctccgattattcccatgctatcagcatcactggagaat
tacattaaggtggcagcatccaactctggaagttcaaatcttctgcctaacaaaacttca
accgagaatacagagtcatcaggtgaagtgttagatggcttcttatggactgtgaccatg
atcgttggccatgtacacctcgatgatgaacaacttcaaatgcagggaggtttgatcgaa
ctgattgtagcttatcaaataattcaccgtctgcgagatttgtttgccctttatgatagg
ccccaggtggaaggatccccactcccatcatctatacgctttggtctcaaccttttggct
gtcttaacatctaaacctggaaatttctctaccattgattgggagtcctgcaaatgcagg
acattaggtggcactatagttcaagaatatgaatatcttagctcacaagacagtatgggg
aaccagttgatgacactagagcagtctggagataacaaattggcatccttgtgtagtgaa
ctgcctgaagaaaacaaatcatgtaaactgcatgacttgagcattcctggggacagaaaa
ttggttgatgaagctagaaaagacttgatacctgtctcaggtggcctgaataatccagca
atgcaaccacctgatttggggattgctacagagaagcgttctgaaattcctagccaggga
gatgaaaatagcacaatcgacagttttcttgaaggaagaaaggtgaacaatgtaggttca
gggtataacagtagtcctggaaaaggcaacgagacaagcctaaagcatcctgtaatgctt
ttactttctgctatgactgagactggccttgttagtctaccatcacttttgactgctgtg
ttgctccaggcgaacaacagatcatcttcagaacagacttcagctattcttccatcaaat
tttgaagaagtagccactggtgtattaaaagttttgaacaatgtggcacgcttggatata
aatcttctgcagtgcatgctggctagatcagatctaaagatggagttcttccatttaatc
agcttccttctgagccattgcatgaacaaatggagagtaccaaacgatcaggttggtttg
ctgcttctagagtctctgctacttcttggctacttttctttgttccatgctgagaaccaa
gctgttcttcggtggggaaagagtcccaccatacttcacaagctgtgcgacttgccattt
gttttcttcagtgaccccgagttgatgcccatcttggctgctgctctgatcgctgtttgc
tacggttgcgatcagaatcgaagtgttgtacaacaggaaataagcacggatatgcttcgt
tctttgctcaagtcctgtcaaacatcattgacttctccagattccattgctgtagatggt
tctggaaacaattccagtgataacacgcagagtttacttgataccaggagcccacaaggt
gacatcccaataaggtcaagccgcaaaattggacggccagttgttgggaagggtgtttca
ggaggcatcagattcaacagaaatagggttcagaaggatggtagaggaagaggtgttgat
gatgggcctctgaagcaaagagctggtgaagcttcatctaacttcatgttgcatagaaag
atcccagcttctttcttggacagagccgaggagttcttctgcagtgagacatga
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