Setaria viridis (green foxtail): 117849282
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Entry
117849282 CDS
T07951
Name
(RefSeq) amino acid transporter AVT1C
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117849282
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svs02000
]
117849282
Transporters [BR:
svs02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
117849282
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GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
117849282
NCBI-ProteinID:
XP_034586735
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Position
3:40726556..40730160
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AA seq
584 aa
AA seq
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MDRDEEMGHGDRSLLFIGDEDDDLGADRDGGSPPTSSDEGSFSERSDDDARTPRGGRGRG
GDERGDAPDDGQKGTWPQSYRQSIDMLSAVPSPTVSTLMAASPSLTKFGSSFIKAGSSFF
LKKGEGSLLPLTRPLLPTSLSQLSQSSLHRPPVKQSTDNLGLPPRPPAAHEAGLPERPSR
VCLKSDYIELPPPASKCSSGQSIINGFNVLCGVGILTTAYGIKEGGWLSLLLLPLLGGSS
CYTGLLLKRCIDSSPNIETYPDIGQVAFGIFGRIFVSVVLYMELYASCVEYITLLGDSLS
SVFPSAHLAFTGVDLNAHNLFAITMALAILPSVWLRNLSLLSYLSAGGVIATITVIVCLF
WVGIGEGIGFHPSGAIVNVTHLPVALGLYGYCYSGHSVFPNIYSSMKDRSQFPFVLLFCF
TVVTLVYAGVAVSGFLMFGESTMSQFTLNLPQQYIPSKIAIWMTIVNPYTKYALTMTPVA
LSIEEALPQKMQSYLVGMSVRTCLVLSTVAVALLFPYFALVMALLGSVFTMLVALILPCA
CYLSIKKGAVPLWEIILCIIIIMIGVVCACVGSYTSINQMISSR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgacgaggagatgggccacggcgaccggtcgctgctgttcatcggcgacgag
gacgacgacctcggcgccgaccgggacggcggctccccgccgacctcctccgacgagggc
tccttctccgagcggagcgacgacgacgcacgcaccccacggggcgggcgcggccgcggc
ggcgatgagaggggcgacgcgcccgacgacggccagaagggcacgtggccgcagagttac
aggcagtcgatcgacatgctgagcgcggtgccgtcgccgacggtgagcacgctcatggcg
gcgagcccgagcctcaccaagttcgggagctccttcatcaaggcagggagctccttcttc
ctcaagaagggggagggctcgctgctgccgctcaccaggccgctgctgccgacttcgcta
tcgcagctctcgcagtcgtcgctgcaccggccgcccgtcaagcagtccacggacaacctc
ggcctcccgccgcggccgccggctgcgcacgaggccgggctgccggagcggccgtcgagg
gtgtgccttaagtccgactacatcgagcttccgccgcctgctagcaagtgcagcagcggc
caatcaatcatcaatgggtttaatgttctttgcggcgttggaattctcaccacggcttat
ggaatcaaggaaggaggatggttaagcctcctactgctgcccttgttgggtggcagttcg
tgctacactggcttgcttctgaagagatgcatagacagttcaccgaacattgagacatac
ccagatattggacaagtcgcttttggtatatttggtcgaatctttgtatcggtggtactt
tacatggagctttatgcaagctgtgtggagtacatcacactgctaggagacagcttatcc
tcagtgtttccctccgcacatttagcttttaccggtgtcgacctgaacgcacataatctt
tttgcaatcacaatggccttggcaattcttccatcagtctggctcaggaacctcagcctc
ctctcatatctttctgctggaggtgtgatcgcaacaataacagttattgtttgcctattt
tgggttggcattggagaaggaattggattccacccttctggtgctatagtgaacgtgacc
caccttccagtggcacttggcctgtatggatactgctactcaggacactcggtttttcca
aacatatattcgtcaatgaaggaccgctcgcagtttccatttgtgctcctgttctgcttc
acagtggtcacactcgtgtatgctggagttgctgtctcagggtttctgatgtttggcgag
tccactatgtcacaattcacactgaacttaccacaacagtacattccctcgaaaattgcc
atttggatgacgattgtgaatccatatacaaagtatgccttgacgatgacgccagtagcc
ttgtcgattgaggaggcgctgcctcagaagatgcagagttacctggttggaatgtctgtt
cggacatgccttgtcctctcaactgttgcggtggctctgctttttccatatttcgctctc
gtgatggcattgcttggatctgtcttcacaatgcttgtggctctcatactcccatgtgca
tgctatctctccatcaagaagggtgcagtacctttgtgggagataatcctgtgcataatc
atcataatgatcggggtcgtttgcgcttgcgtcggatcatacacctcaatcaaccagatg
attagtagcagatag
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integrated database retrieval system