Setaria viridis (green foxtail): 117849511
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Entry
117849511 CDS
T07951
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117849511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117849511
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117849511
Prokaryotic type
Archaeal type
TFB
117849511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Motif
Other DBs
NCBI-GeneID:
117849511
NCBI-ProteinID:
XP_034586971
LinkDB
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Position
3:11316363..11317544
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AA seq
272 aa
AA seq
DB search
MEGPSASGRGLKRLRGTVTLSLKTPGEQPAAASSPVGEEEEQQPAAACGATMMRGPVQTG
KKAASEGCRAIADMAARLGVAPGVRDRALEMFRRMEEVKGRAHHYYTKGAGRSGDALYAA
CLYLACRSAGAPRTFKELAAATRDGAAARKDIGRLITLIRTRLGDEAGGEAMDIGVVRAA
DYMERFGSMLGMGEGEVRAVQEAARRMQDHLDVRHNPDSTAAAIIYMAMERRSPGAGTRK
SIRDVSVATGVADNTIKQAYRELYQHAHLLFD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggagggaccatcagcatccggccgcggcctcaagaggttgcgcggcaccgtgaccctc
tcgctcaagacgccgggggaacaacccgccgcggcctcctcgccggtgggcgaggaggag
gagcagcagccggccgcggcgtgcggggcgacgatgatgcgcgggcccgtgcagaccggc
aagaaggcggcgtccgaggggtgccgggccatcgccgacatggcggcccggctcggggtc
gcgcccggggtgcgggaccgcgccctggagatgttccgccggatggaggaggtcaagggc
cgtgcgcaccactactacaccaagggcgccggcaggagcggcgacgcgctctacgccgcg
tgcctctacctggcgtgccgctccgcgggggcgccgcggacgttcaaggagctcgcggcg
gcgacgcgcgacggcgcggcggcgaggaaggacatcggcaggctcatcacgctcatcagg
acgcgactcggggacgaggccggcggggaggccatggacatcggcgtcgtgcgcgccgcc
gactacatggagcgcttcggctcgatgctcgggatgggggagggcgaggtgcgcgccgtg
caggaggcggcgcggaggatgcaggaccacctcgacgtgcgccacaacccggactccacc
gccgccgccatcatctacatggccatggagcgccgctctcccggcgccgggaccagaaag
tccatccgggacgtctccgtggccaccggtgtcgccgacaacaccatcaagcaggcgtac
agggaactctaccagcacgcccacctgctcttcgactga
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