Setaria viridis (green foxtail): 117849542
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Entry
117849542 CDS
T07951
Name
(RefSeq) chloride channel protein CLC-a
KO
K05016
chloride channel 7
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
svs01009
]
117849542
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117849542
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
svs04040
]
117849542
Protein phosphatases and associated proteins [BR:
svs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117849542
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117849542
Ion channels [BR:
svs04040
]
Chloride channels
Chloride channel (CLC)
117849542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
Motif
Other DBs
NCBI-GeneID:
117849542
NCBI-ProteinID:
XP_034587007
LinkDB
All DBs
Position
3:37489004..37492248
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AA seq
794 aa
AA seq
DB search
MEDEQSQRPAGEPAAEPGPAPELECKNEDGVEDLEDPESTAGNGISSLEQPLLKRSPTLT
ASHLAIVGAKVSHIESLDYEIIENDLFKHDWRSRSNVEVLQYIFLKWAMAFLVGLLTGVI
ASLINLAIENITGLKMLHMVGLVREGRYWAGFLYFAGVNLALTFVAAVLCVVFAPTAAGP
GIPEIKAYLNGVDTPNMFGAPQLIVKIIGSIGAVSSGMDLGKEGPLVHIGACLANLLSQG
GEGRWRLRWRWLRYFNNDRDRRDLITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALL
WRTFFSTATVVVVLRGFIEVCRDGRCGMFGEGGLILFDVSSVTVRYHLGDLLPVTIVGVL
GGVLGALYNHVLHQVLRLYNLINAKGRLAKLALALAVSVITSAGLYMLPFAVPCTPCSAA
GAAADFCPTVGKSGNFKKFNCPDGFYNDLASLLHATNTDATRNIFSTGTAGEFRLDSLLI
FFAVYCVLGLITFGIAVPSGLFLPIILMGSAYGRILALLLARFVHIDHGLYAVLGAAALM
SGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDAFNPSIYEIILDLKGLPFLEP
KPETWMKDLTVGELAAAKPRAVTLQVVEKVSTIVAVLRATPHNGFPVLDRPRPGVSELHG
LVLRQHLMAVLRKRWFLQEKRRTEEWEARERFSSTELAEKAGSIDDVQLSPEELDMYIDL
HPFTNTTPYTVVETMSVAKAVVLFRTCALRHMLIIPKFQGLEISPIMGILTRQDLRAHNI
LGAFPHLANKRKVH
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagcagagccagagacccgccggggagccggcggccgagcccggtcctgcg
ccggagctggaatgcaagaatgaggacggtgtggaggacctggaggaccccgagagcacc
gccggcaacggcatcagctccctggagcagccgctgctgaagcggagccccaccctgacg
gccagccacctcgccatcgtcggcgccaaggtctcccacatcgagagcctcgactacgag
atcatcgagaacgatttgttcaagcacgactggcggagccggtccaacgtggaggtgctg
cagtacatcttcctcaagtgggcgatggcgttcctcgtcggcctcctcaccggcgtcatc
gcgtcgctcatcaacctcgccatcgagaacatcaccggtctcaagatgctgcacatggtg
ggcctcgtccgcgagggccgctattgggcgggcttcctctacttcgccggcgtcaacctc
gcgctcaccttcgtcgccgccgtgctctgcgtcgtcttcgcccccaccgccgccggcccc
ggcatcccggagatcaaggcctacctcaacggcgtcgacacgcccaacatgttcggcgcg
ccgcagctcatcgtcaagatcatcggcagcatcggcgcggtgtcctcggggatggatctc
ggcaaggagggcccgctggtgcacatcggcgcgtgcctggcgaacctgctgagccagggc
ggcgagggccggtggcggctacgctggcggtggctgcgctacttcaacaacgaccgggac
cggcgggacctcatcacctgcggcgcctcgtcgggggtctgcgcggcgttccggtcgccc
gtcggcggcgtgctcttcgcgctcgaggaggtggcgacgtggtggcggagcgcgctgcta
tggcgcaccttcttcagcacggccaccgtcgtcgtcgtcctccggggcttcatcgaggtc
tgccgcgacggccgctgcggcatgttcggtgagggcgggctcatcctcttcgacgtcagc
agcgtcaccgtccgctaccacctcggcgacctcctccccgtcacgatcgtcggcgtcctt
ggcggcgtcctcggcgcgctctacaaccacgtcctccaccaggtgctccgcctctacaac
ctcatcaacgccaaggggcggctggcgaagctggccctcgccctcgccgtctccgtgatc
acctcggcggggctctacatgctccccttcgccgtgccctgtacgccctgctctgccgcc
ggcgccgccgccgatttctgcccgacggtgggcaagtccggcaacttcaagaagttcaac
tgccccgacgggttctacaacgacctggcgtcgctcctccacgccaccaacaccgacgcc
acccgcaacatcttctccacgggcaccgccggcgagttccgcctcgactccctgctcatc
ttcttcgccgtctactgcgtgctggggctcatcaccttcggcatcgccgtgccgtccggt
ctcttcctccccatcatccttatgggctccgcctacggccgcatcctggcgctcctgctc
gcgcgcttcgtgcacatcgaccatggcctctacgccgtgctcggcgccgccgcgctcatg
tcggggtccatgcggatgaccgtctcgctctgcgtcatcttcctcgagctcaccaacaac
ctcctactcctccccatcaccatgttcgtgctcctcatcgccaagaccgtcggcgacgcc
ttcaaccccagcatctacgagatcatcctcgacctcaagggcctgccgttcctcgagccc
aagccggagacgtggatgaaggacctcaccgtcggcgagctcgccgccgccaagccgcgc
gccgtcacgctccaggtcgtcgagaaggtgtccaccatcgtcgcggtgctgcgcgccacg
ccgcacaacggcttccccgtgctcgaccggccacggccgggggtgtcggagctgcacggg
ctcgtgctccggcagcacctcatggccgtgctcaggaagcggtggttcctgcaggagaag
aggaggacggaggagtgggaagcgagggagaggttctcgtcgacggagctcgccgagaag
gccgggagcatcgacgacgtgcagctgtcgccggaggagctcgacatgtacattgacctc
cacccgttcaccaacactacgccgtacaccgtcgtggagaccatgtccgtcgccaaggcc
gtcgtgcttttccgcacctgcgcgctccggcacatgctcatcatcccaaagttccaaggc
ctagagatatctccgattatggggatcctgacaaggcaggatctgagggcgcacaacatc
cttggtgccttccctcatctggccaacaaaaggaaagtccactga
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