Setaria viridis (green foxtail): 117849576
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Entry
117849576 CDS
T07951
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117849576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117849576
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117849576
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117849576
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
117849576
NCBI-ProteinID:
XP_034587055
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Position
3:complement(5489364..5495083)
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AA seq
349 aa
AA seq
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MDMDSVECLSLPDAALDVDDVDSHPHHAHHGHLGLPLHPAHLPSAGGGGGRAFPKVNAGS
GAGAAGAAGAAGAAGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRC
PTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAG
SECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFC
LHFEAYQLAMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVR
DSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLCS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacatggacagcgtcgagtgcctctccctcccggacgccgccttggacgtggacgac
gtcgatagccacccgcaccacgcccaccacggccacctcggcctcccgctccaccccgcc
cacctgccctccgcggggggcggcggcggccgcgcgttccccaaggtgaatgccgggtcc
ggggcgggcgcggcgggggcagcgggcgcggcaggagcggccgggggcccgccggcgacc
agcgtgcacgagctgctcgagtgccccgtctgcaccaactccatgttcccgcccatccat
cagtgccaaaatggacatactttgtgttcaacgtgcaaggccagggtgcacaaccggtgt
cctacatgcagacaagagcttggtgatatcagatgcttggcactggaaaaagtagcggag
tcactagagcttccttgtaagtactgctctttaggttgccccgagatcttcccatactac
agcaagataaagcatgaagcgcagtgcagcttcaggccatataattgcccttatgctggc
tctgaatgtgctgtggctggtgatattccattccttgttgcacatttgagggatgatcac
aaagtcgacatgcacagcggctgcacattcaaccatagatacgtcaaatccaacccacga
gaggttgaaaacgccacctggatgctaacagtattccattgttttgggcagtacttttgc
ctgcactttgaagcctaccagctcgcaatggctccagtttatatggctttcctccgattt
atgggggatgagaatgaagcaaggaactatacatatagccttgaggtcggtggcaacggt
aggaaaatggtatgggaaggcactccaaggagcatccgcgacagccaccgcaaggttcgg
gacagccatgatggccttatcatccagaggaacatggccctgttcttctcgggtggtgac
aggaaggagctgaagctgagggtgactggacggatatggaaagagcagaccaacccggat
ggagcctgcattccgaacctttgcagctga
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