Setaria viridis (green foxtail): 117849598
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Entry
117849598 CDS
T07951
Name
(RefSeq) eukaryotic translation initiation factor 5B
KO
K03243
translation initiation factor 5B
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
svs03012
]
117849598
Translation factors [BR:
svs03012
]
Eukaryotic type
Initiation factors
eIF-5
117849598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
MMR_HSR1
GTP_EFTU_D4
GTP_EFTU_D2
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
117849598
NCBI-ProteinID:
XP_034587094
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All DBs
Position
3:complement(45147928..45153178)
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AA seq
884 aa
AA seq
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MSSRTPQAGSRAAAGGGGGRRKAAASGAKPAPRQHVRMIQEQLARAHEEERRAEERRREE
EERRAEEERRAREEAERRVEEERRVREEKRRRRQEEVKKRGEREERRRMEDVRRRLGIAV
PDASSGDGGSGAQRRPVYESKKSKSQPKRHENVQSEANLGETQVFEQQLEDLQSNGSLED
TDGVMVDALELGEEQISQPSSEESNGIDDDDAWENKSFDEFDQTEEKHVASAAPIANSVS
LSEVIGEDVVSILKDEGAGNRFDRELRAPICCILGHVDAGKTKLLDCIRRSNVQGGEAGG
ITQQIGATYLPVENIRERTSLKAEATIKVPGLLVIDTPGHQSFSNMRLRGSSLCDVAVVV
VDITRGLEKQTIESLDLLKQRNVRFIVALNKVDRLYGWKTCPNAPIAKALKNQSEDVQRE
FKWRLTEVVTQLKGSGFNASLYYENKKVKEVVNIVPTSSVSAEGIPDLLLLLVRWVPEIM
MERLTYVDNVECTVLEVNEDKDFGTTIDVVLINGVLRKGDRIVVCTKQGLVTTNIRYLLT
PYPMKELKAKGVYKHHEELKAAQGAKIAVRGLRHAIAGTALIVVKQGDDLEQAEVAAVQE
INKVNNLINEDERGESDDGRAIQAISRVKTCTEGVYVQASSLGTLEAIIEHLKTLSLDIP
VSGCNLGPVHKQDVMKATAMLKRKEEYAAILAFDVKVMPEAFDLAAESGVKIFMADTVYK
LVGRFTDHIKKLKEDKKKQYAAEAVFPCTLKILPNRVYHKKDPIVCDVEVLEGIVKVGTP
IFVSVPSKDRGADVIHSLGRIISMETSNGMQIDSTKRGVVSIKIIGENPQERSRLYGRHF
NADNELLSQISRKSIDVLKEYYRDEMSDENWQLIRRLKKQFGIP
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaggacgccccaggcggggtcccgcgccgccgctggcggcggcggaggccgg
aggaaggcggcggctagtggcgcgaagccggcgccgaggcagcacgtccggatgatccag
gagcagctggcgcgcgcgcacgaggaggagcgacgagcggaggagaggcgccgggaggag
gaggagaggcgcgcggaggaggagcgcagggccagggaggaggcggaaaggcgcgtcgag
gaggagaggagggtgcgggaggagaagcggcggaggaggcaggaggaggtgaagaagcgc
ggggagcgggaggagaggcgacggatggaggatgtgcggaggcgtctcggtatcgcggtc
cctgatgcttccagcggtgatggaggcagtggtgcgcagagaaggcccgtgtatgagtcg
aagaagtctaaatcgcagcctaagcgtcatgagaatgtccaatctgaagccaatttggga
gaaactcaggtatttgagcagcaattggaagatttgcagagcaatgggtccctggaggat
actgatggtgtgatggttgatgctctggaattgggggaggaacaaatttcccagccatca
tcggaagagagcaatggaatcgacgatgatgatgcttgggagaacaagagctttgatgaa
tttgaccaaacagaggagaagcatgtggcgtctgctgctccaattgctaactcagtgagt
ttatctgaagtaattggggaagatgtggtctctatccttaaggatgaaggtgcaggcaat
aggtttgacagggagcttcgagcaccgatatgttgcatcctcggtcatgtggatgctgga
aagacaaagctccttgattgcatccggcgaagcaatgtgcagggtggggaggctgggggc
atcacgcagcagattggtgcgacctacttaccagttgagaatatcagggagaggacctcc
ctgaaagctgaggccaccatcaaagttcctggattgcttgtaattgacacccctggccat
cagtcattcagtaacatgcgcttgaggggatcaagtttgtgtgacgttgctgtagtggtt
gtcgatattacacgtgggcttgagaagcagaccatcgagtcccttgatcttttgaaacaa
cgcaatgtgaggtttattgttgccctgaacaaggttgatcggctatatgggtggaagact
tgtcccaatgcaccaatagcaaaagcgctcaagaaccaatctgaagatgtccaaagggaa
ttcaaatggagattaactgaggttgtaacacaactgaagggaagtggcttcaacgcttcc
ctgtattatgagaacaagaaggttaaagaagtagtcaatattgtcccaaccagctctgta
agtgctgaaggcattccagaccttcttcttctgcttgtgcgatgggttccagaaataatg
atggagagactgacatacgtcgataatgtggagtgtactgtgctggaagtcaatgaagat
aaagactttggaactactattgatgtagtgctgattaatggtgtacttcggaaaggtgat
cgaatagttgtttgcaccaaacaggggcttgtcacaaccaacataagatatttgttgact
ccttatcccatgaaagaactgaaagctaagggagtatataagcaccacgaggagcttaaa
gctgcccaaggggcaaaaattgcagtgcgaggactgcgccatgctattgctggcactgct
ctcattgtggtgaagcaaggggatgatctggaacaagctgaagtagctgcagtgcaagaa
atcaataaggtcaacaacctgatcaatgaggatgaaaggggtgagagtgatgatggaaga
gcaatacaagcaataagtagggtcaaaacatgcactgagggtgtctatgtgcaagcatcc
agtcttggaactttggaagccattattgagcatttgaagaccctttctttggacatccct
gttagtggttgcaacttaggcccagtccacaagcaggatgtcatgaaagcaactgctatg
ctgaagaggaaagaagagtatgcagccatcttggcctttgatgtcaaagtgatgcctgag
gcttttgaccttgctgctgagtcaggggtaaagatttttatggctgataccgtgtacaag
cttgttggcagatttactgatcacattaagaaactgaaggaagacaagaagaagcaatat
gcagctgaggcagtgttcccatgcacccttaagattctgccaaaccgtgtctaccataaa
aaggatccaattgtttgtgatgttgaagttctggaaggcattgtcaaggtgggaacccca
atttttgtctctgttccaagcaaggacagaggtgcagacgtgattcatagccttgggagg
atcatctcgatggagacatccaatggcatgcagattgattctaccaagagaggagtcgtg
tcgataaagattattggggagaatcctcaggagaggtcccgattgtatggacggcatttt
aacgccgacaacgaactgctaagccaaatctctaggaaatctattgatgtgctgaaagag
tactaccgggatgagatgagtgatgaaaattggcagcttatccgcaggctaaagaaacaa
ttcggaataccctga
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