Setaria viridis (green foxtail): 117849599
Help
Entry
117849599 CDS
T07951
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117849599
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svs01007
]
117849599
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117849599
Enzymes [BR:
svs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117849599
Amino acid related enzymes [BR:
svs01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117849599
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117849599
Prokaryotic type
117849599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
DUF2740
EAD7
Motif
Other DBs
NCBI-GeneID:
117849599
NCBI-ProteinID:
XP_034587095
LinkDB
All DBs
Position
3:complement(2337894..2345136)
Genome browser
AA seq
594 aa
AA seq
DB search
MPTVGVGRDRFFVALGRAYTQEEFDLLCFAFGIELDDVTTEKAIIRKEKHLDDDGDVEGD
DEVIYKIEVPANRYDLLCLEGLSRALRVFTGSEAIPVFRVSSIPRGSMLQMHVKPQTSQI
RPHIVCAVLRGVTFDEARYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQAPFSYEALP
PHEINFVPLKQEESFRADKLMEFYKSDMKLKKFLHIIENSPVYPVIYDSNRTVLSLPPII
NGAHSAITLATRNVFIECTATDLTKAKIVLNTMVTMFSEYCENKFEVEPVEVVHHDGSKT
VYPDLSCYKMEAPLSHILGPIGISLDAKQVVCLLNKMQLQAESHSLKGEPWISVSVPPTR
SDILHARDLVEDVAIAYGYNNVPKSKPKCMTIGGRQPLNRFSDKIRAEVARAGYMEVLTF
ILSSHEENFDMLNRTDDKSKAVIIANPRTSEFEVVRTSLMSCLLKTLKHNIDHPRPIKIF
EVGDVVTLDPSRDVGASNNRRLAALYCNRVSGFEEIMGLVDSIVKVVRAPHVNFGEKYYV
PTNEPEFFPKRQCKIVTSDGKQVGYLGVVHAEVLRKFGIPDPCTFVEMDIEALL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtgggcgtcggccgcgaccggttcttcgtcgccctcggccgagcctacacg
caggaggagttcgacttgctctgcttcgcgttcggcatcgagcttgacgatgtgacgacg
gagaaggctattatcaggaaggagaagcacctcgatgatgacggcgatgtggagggcgac
gacgaggtcatctacaagatagaggtccccgccaacagatacgatttgctatgtcttgaa
ggattatctagagcgcttcgtgttttcactgggagtgaagcaatccctgtattccgagtt
tcttccatccctcgtggttcaatgcttcagatgcatgttaaaccacagacttcacaaatt
agaccacacatagtttgtgctgtcctaagaggggtaacttttgatgaagcaagatacaac
agtttcattgatcttcaagacaaactccaccaaaatatttgcaggaagagaactctggtt
gctattggtacccatgatctcgataccctgcaagctcctttctcatatgaggctctacca
ccacatgaaatcaactttgtcccattaaagcaggaggaaagcttcagagctgataaactg
atggaattctataaatcggacatgaaactgaagaagtttttgcatataattgagaattct
ccggtgtaccctgttatctatgatagcaacaggactgtattatcgttacctcctatcatc
aatggtgcacattcagctatcacccttgcgacaagaaatgtctttattgaatgtacagct
actgaccttaccaaagcaaagattgttttgaatacaatggttaccatgttctctgagtat
tgtgagaataagtttgaagtggaaccagttgaagtggtacatcatgatggcagcaaaact
gtgtaccctgacctttcatgttacaaaatggaggctccactatctcacattcttgggcct
attggcatctccctggatgcgaaacaggttgtttgtcttttgaacaaaatgcaactgcaa
gctgaaagtcactcattgaagggtgagccttggatttcagtatctgttcctccaacaaga
agtgatattctgcacgctcgtgatttggtggaggatgttgctatagcttatggatacaac
aatgtgccaaaatcaaagccgaagtgtatgactataggaggaaggcagccattaaacaga
ttctcagataaaattcgtgctgaggttgcaagagctggttatatggaggtgctcacattc
atcttgtcttcacacgaagaaaactttgacatgttgaacagaacagacgacaaaagtaaa
gcagtcattatcgcaaaccctcgcacttctgaatttgaggttgttagaactagtctgatg
tcgtgtttactgaaaacactgaaacataatatagaccatccaagacccataaagattttt
gaagttggtgatgtagtgacgctggacccctcacgcgatgttggtgcctctaataatcgc
cggcttgcagctttgtactgcaatagggtttctggatttgaggaaattatgggattggtg
gatagtattgtcaaagttgtcagagctccgcatgtcaactttggcgagaagtactatgtt
cctacaaatgaacctgagttcttcccgaaaagacaatgcaaaattgttacaagtgatggc
aagcaggttggctacttgggagttgtccatgctgaggtgctaaggaaattcggcattccg
gatccctgcactttcgttgagatggacattgaagccctattgtag
DBGET
integrated database retrieval system
