Setaria viridis (green foxtail): 117849609
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Entry
117849609 CDS
T07951
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
117849609
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
117849609
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
117849609
NCBI-ProteinID:
XP_034587112
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Position
3:24805622..24811151
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AA seq
713 aa
AA seq
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MPFSPRRRLRRLARSLRAMYPSAAAPDADATAGDERRAWEPPFDASAPAPPMSYPITDLA
ALASRAYLSAAANFHLPFNMASVPGSGDPLPARRRVLVCHDMEGGYRDDAAAQGGGNPDA
YALWHWHLIDVFVYFSHYLVTLPPPCWTNAAHLHGVKVLGTFITEWDKGAEVCKEMLATE
ASAQMYAERLTELAAALGFDGWLINIEVKLDVQFIDNLKEFVNHLTKTMHAAVPGSLVIW
YDAITVKGDLDWQNKLNKYNKPFFDLCDGLFANYTWKKKDPEDSAAVAGDRKYDVYMGID
VFGRNTFGGGQWTTNVALDLLKKVDVSTAIFAPGWVYETKQPPDFESAQNRWWGLVEKSW
GVLRRYPKQLPFYTYFDQGHGYQVSIKGHQVSSDPWNNISSQSFQPMLKYTGDQAQLQAF
INFKDEPYSGGNCLTVKGSLRQNIIFSEQLFNGGLGMEDGSIHLFYSVRADAGSALGLSL
NLSSNKQSTSILVAEDIASFITKKQNHKYGSYVKADEVEPHAPDNQGWVLYEATLQSSSG
YKLTGINVVCTLKIAGEMSPETEEDMISEANANGSSPYHVSLGHISIQKTDANTEFPPAG
SWVTEGEHISWSNSSDTTKRVSLKLSWKLNTLDQPSFRQYNIYVEKSTADPNIKASRSYL
GVASVDAFYVSGLEVPSEVTDLKFIIQACAHDGSWQELEKCPKFLLVPVHSEL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcccttctccccgcgccgccgcctccgccgcctcgcccgcagcctccgagccatgtac
ccctccgccgcagcgccagatgccgacgccaccgcgggcgacgagcgccgcgcgtgggag
ccgcccttcgacgcctccgcgccggcgccgcccatgtcctacccaatcacggacctcgcc
gcgctcgcgtcgcgcgcctacctctccgccgccgccaacttccacctccccttcaacatg
gcctccgtccctgggtccggggatccgctccctgcacgccggcgcgtcctggtgtgccac
gacatggagggcggctaccgcgacgacgcggcggcgcagggcgggggcaacccggacgcc
tacgcgctctggcactggcacctcatcgacgtcttcgtctacttctcgcactacctcgtc
accctcccgccgccctgctggaccaacgccgcccacctacacggcgtcaaggtgttggga
acgttcatcacggagtgggataaaggtgcggaagtttgcaaggagatgcttgccacggag
gcttctgcccagatgtatgccgagaggcttacggagctggctgctgccttgggcttcgat
ggctggctgataaacattgaggttaaacttgacgttcagttcatcgataacctgaaagag
ttcgtcaatcatctaaccaagacgatgcatgctgccgttcctggatctttggtcatatgg
tatgatgcaatcactgttaaaggtgacctcgactggcagaataagctcaacaagtataac
aagccattctttgatttatgtgacgggttgtttgccaactatacttggaagaaaaaagac
ccggaagattcagctgcagttgctggagacaggaaatatgatgtctacatgggtattgat
gtttttggacgaaatactttcggtggtggtcaatggactacaaatgttgcccttgatcta
cttaagaaagttgatgtctcaactgccatatttgctcctggatgggtatatgaaactaaa
caacccccagactttgagagtgcacaaaatcgttggtggggccttgttgaaaaatcatgg
ggagttcttcggaggtatccaaaacagttgccgttttacacatattttgatcagggtcat
ggctatcaggtgtctattaaagggcaccaagtctccagtgatccatggaacaatatttct
tcccaaagttttcagcctatgcttaagtacaccggagatcaagctcaactgcaagccttt
ataaatttcaaggatgaaccatacagtggagggaattgcttgacagtcaaaggaagcctc
cggcagaacattattttctcagagcagctttttaatggaggacttggaatggaagatgga
tctattcatctattttattcggtaagagccgatgcaggctctgcgttaggattgtccctg
aacttgtcttcaaacaagcagagtacttcaattcttgttgcagaggacatagcatcattc
atcacaaagaaacaaaatcacaagtatggctcgtatgttaaagctgatgaggtggagcca
catgctccagataaccaaggttgggtcctctacgaagcaactcttcagtccagttccggc
tacaaattaactggaatcaacgttgtttgcacattgaaaatagctggcgaaatgagtcca
gaaacagaggaggatatgatctcggaagcaaatgcaaatggatcatcaccgtatcacgtg
tcacttggtcacataagtattcaaaagactgatgcaaacacagagttccctccagcagga
tcatgggtaactgaaggcgagcacatctcatggtccaacagttctgacacaacaaaacgt
gtgagtctgaaactcagctggaagttgaatacccttgatcaaccatcattcaggcagtac
aacatctacgttgagaagtcaacggcagatccaaacatcaaggcttccagaagctatctt
ggagttgctagtgttgacgccttctatgtctcgggcctagaggttcccagcgaagtcact
gatcttaaattcattattcaagcgtgtgcacacgatggaagctggcaagaacttgagaaa
tgcccaaagttccttttagttccagttcattccgagctgtaa
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