Setaria viridis (green foxtail): 117849650
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Entry
117849650 CDS
T07951
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
svs01001
]
117849650
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117849650
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117849650
Protein kinases [BR:
svs01001
]
Serine/threonine kinases: Other
Other
117849650
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117849650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCAF1_helical
DCAF1_4th
Mahjong_helical
Beta-prop_THOC3
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_IFT122_1st
LisH
ARM_ARMC5
ANAPC4_WD40
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_VPS8
LisH_PAC1
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
117849650
NCBI-ProteinID:
XP_034587164
LinkDB
All DBs
Position
3:240952..249388
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AA seq
1910 aa
AA seq
DB search
MADKDSAPAADGPASAPPQEDEEALLARAQNVISRVLERERDPNPNPRLLHTLATMCELQ
EARYIQLSASNPTPNNNTNARSTYTIGKLANLFRDNDDFYELVFCKFLSDTSYSVAVRAA
AARLLLSCHSASTPQYPHAFEDSIIENIKKWVTEDFEASSECEWKYLGINKPTDAEMLRT
YAIGLLAMALCSGGQLVEDVLTMGVSAKLMRFLRIRVLGEASSSQKDSNHPQDTRHPRGR
DDNRGKSRLAHDVSRLDGTRVGYGTLTGLTAEKDNEPGVGMRQALGERLMDDTVASSDNR
DIPEADGTNDQSYGTSICDAKSKFGERHSAARLAKDEDISENGELLKRKLNRGTARLKVK
GKAGESCPESEMTPLSPTSGLRIGGRATRERNAVRVDDPKKATDANNRSAGLESFSAISR
EEYEDRFRDCIIGLKDISDIVLKAVRAAESEARSANAPDEAVKAAADAAAELVKSAALEV
WKSEKNGDAVVLAAEKAASAIVEAAVSTSVSRSSNQVGVKHAVEEAVQTSKDQDLENFVI
SDQGQLLQLREKYSIQCLQILGEYVEALGPVLHEKGVDVCLALLQRSMKDQEGHDHFALL
PDVLKLICALAAHRKFAALFVDRGGIQKILSVPRITQTYMGLSACLFTFGSLQSTMERVC
ALSSDTLDSVVELALQLLGCPQDLARKSAAIFFAAAFVFKAVLDLFDARDGMQKLLDILY
GCASGRSSGNSGGLGSSHINQGNDQLPAEVLTASEKQVAYHTCVALRQYFRAHLLQLVDS
IRPSKSIRSIARNTSSARAGYKPFDISNEAMDAVFRQIQRDRKLGPALVRARWPVLDKFV
ASNGHMTMLELCKFQAHGDRYLRDLTQYAFGVLHIITLMPHPHVRKPIVHATLSNNRVGM
AVLLDAVKSFDYIDHEVICPALNVLVNLVCPPPSISNKPSSTANQQPAAAQALVSESRDK
NFEKSVSDRNLVANHGESRERSGDGNPSERNNTLHQGTPCTPVVPSGVVGDRRITLGVGV
GGPGLAAQLEQGYRQAREVVRANNGIKILLQLLSSRMVTHPVAIDSIRALACRVLLGLAR
DDAIAHILTKLQVGKKLSELIRDTSAQTSGGDSGRWQAELTQVAIELIGVLTNSGKETTL
AATDAAAPALRRIERAGIAAATPISYHSRELMQLIHEHLLGSGFTATAAMLQKEAGLAPL
PLTAAVLPAHQVSALEASSVQQQWPSGRVHGFLSDKTNISTDQSAQRSDSVLPSSKKKAL
TFSSSFSQRTLSPHPVSLNRASNNPLKSPVPIGSDTGDADTLHKTPLSLPLKRKLVDMKD
LNSSSAAKRSATADQTYQPSAFQTPAPTRKGLSVAVDSPTSFHCGRTNFNNISTDNLDNS
QGTPGTVTTTAHPGVNDQQSGNLERMTLDSLVVQYLKHQHRQCPAPVTTLPPLSLVHPHV
CPEPSRSLSAPANIAARMGSREISRQFSGVQIPRRDRHFIYSRFKQCRVCRDEASLLTCM
TFLGDASRVAAGNHTGELKIFDCNTANLLETQTCHQHLVTMMESTYSGGNELILTSSLNE
VKIWDAFSVSGGPLHTFEDCKAARFSHSGTSFAALSTDTAQREILLYDAQTYTIFQRLPD
NTSNSSSGRGYVQPIIHFSPSDTMLLWNGVLWDTREANPVHQFDQFTDYCGGGFHPAGNE
VILNSEVWDLRKFKLLRSVPSLDQTVIKFNGTGDVIYAILRRNLDDVTSSINARRVRHPL
FPAFRTIDAVTYSDIATVQIDRCVLDLATEPNDSLIGVVAMDDHEELFSSARLFEVGRKR
ITDDDSDPEDAGDTDDEDDDDDDNSDDGVLLEPVLEGESDSDDLSNSSDDGGDDDIPSSD
EIEDDPEFIDDGDLDGGGGLLDIMGDGEGEDDESDMIGSFSSGDEDGWIL
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggattccgcccccgccgccgacggacctgcctccgccccgccgcaagag
gacgaggaggcgctgctcgcccgcgcccagaacgtcatctccagggtcctcgaacgggag
cgcgaccccaaccccaacccccgcctcctccacacgctcgccaccatgtgtgagctccaa
gaagccagatatattcagttgtctgcctctaaccctacgcctaacaacaacacaaatgca
aggagcacctatacaatcggcaagctagcaaatctgttccgggataacgacgacttttac
gagttagtgttttgtaagttcttatcggatacatcttattctgtggccgtacgtgctgcc
gccgctaggctgctcctgagctgccattctgcctcgacgcctcagtatcctcatgctttt
gaagactctatcatagagaatattaaaaaatgggtaacagaagattttgaagcgtctagt
gaatgtgaatggaagtatctaggaataaataaacccacagatgctgagatgctgagaaca
tacgccattgggttgctcgctatggcgttgtgtagcggtgggcagttggtagaggatgtc
ttgactatgggggtatcagcgaagctcatgcgctttttgcgcataagagtccttggagag
gcctcatcttctcagaaagattctaaccatccacaagacaccaggcatcctcggggcaga
gatgataacaggggcaaatcacgtctggctcatgatgtttctcgacttgatggaacaagg
gttgggtatggaacattaactggcctgactgcagagaaggacaatgaacctggtgttgga
atgaggcaagcacttggagaaaggttgatggatgacactgttgcttcatcggataaccgt
gacatccctgaggctgatgggaccaatgatcaatcttatggcacaagcatttgtgacgca
aagtcaaaatttggggaaaggcattctgcggcgaggcttgctaaagatgaagatatcagc
gaaaatggtgaactgttgaagagaaagctaaatcgaggcactgctcgacttaaagtgaag
ggaaaggctggtgaaagctgtcctgaatcagaaatgacacctttatcgccaacctctgga
ttgagaataggaggtcgggctaccagagagaggaatgcagtgagggttgatgacccaaag
aaagcaactgatgcgaacaatagatctgcaggacttgagtcgtttagcgctatctccaga
gaagaatacgaagaccggttcagggattgcattattggcttgaaggatatatctgacatt
gttttgaaggcagtgagagctgctgagtctgaggccagatctgcaaatgcacctgatgaa
gctgtgaaagcagcagctgatgctgctgctgagcttgtgaagtccgctgctttggaggtt
tggaaaagtgaaaaaaatggtgatgcggttgtattagctgcggagaaagctgcatccgct
attgtagaggctgctgtctcaacaagtgtctcacgaagctcaaatcaagtcggtgtaaag
catgcggtggaagaagctgtgcaaaccagcaaagaccaggatttagaaaattttgttatc
agtgaccaagggcagctcttgcaacttagagaaaaatatagcatccagtgtctacagatt
ttgggagagtacgttgaagctttgggtcccgttctccatgaaaaaggtgttgatgtttgc
ctcgcattattgcaaaggagcatgaaagaccaggagggtcatgaccactttgctctactt
cctgatgttcttaaattaatttgtgctttggctgcccaccgaaaatttgctgctctcttt
gttgatcgtggtggtattcagaagatcctctctgttcctaggattactcagacatatatg
ggtctttctgcctgcttatttacttttgggtctcttcagtctacaatggaacgtgtttgt
gcactctcatccgacactcttgacagtgttgttgaactagcacttcaacttcttgggtgc
ccacaagatttagctagaaaaagtgctgccatttttttcgctgctgcttttgtgttcaaa
gctgttctggatttatttgatgcacgggatgggatgcaaaagcttcttgatatcctatat
ggatgtgcatccggaaggtctagtggtaactctggaggactaggatcctcccatataaat
caagggaatgatcagttgcctgctgaagttttgactgcatcagagaagcaagttgcatac
catacatgtgttgcactacggcaatactttagagctcatctccttcagcttgtggattcc
attcggccaagcaaaagcatccgtagtattgctcggaatacttctagtgcaagagctggt
tacaaaccttttgacattagcaatgaggccatggatgctgtctttcgtcagatccagcgg
gacagaaagttaggccccgctcttgtaagagcccgttggcctgtgttggacaaatttgtt
gcctcaaatggtcacatgacgatgctagagttgtgcaagtttcaggcacatggtgatcgg
tatctacgtgatctaactcaatacgcatttggagttcttcacattataacacttatgcca
cacccacacgtccgcaaaccaatagtgcatgccacattaagcaacaatcgtgttggtatg
gctgtcctgttagacgcagtgaaaagtttcgactatattgatcatgaggtgatctgtcca
gcattgaatgttctcgtcaatcttgtatgcccacctccttctatcagcaacaagccatcc
tcaactgccaatcagcaacctgcagctgcacaagcgcttgtttcagaaagcagagacaag
aactttgaaaaaagtgtttcagataggaatcttgtagcaaatcacggtgaatctcgtgaa
cgatctggtgacggcaatccttctgaaaggaataataccttacaccaaggaactccttgc
acacctgttgtaccatctggagtagtcggtgatcgaagaataacgttaggagttggagtt
ggaggtcctggtcttgctgctcaattggaacaaggatatcgtcaagctcgagaagtcgta
agagccaacaatggcataaaaattcttttacagcttctcagttctcggatggttacacat
cctgtggctatagattctattcgagcccttgcctgccgtgtcctgcttggcctggccaga
gacgatgcaattgcacatatactgacaaagctccaggtgggcaagaaattatcagaactg
atccgcgataccagtgcccagacatctgggggtgatagtggaagatggcaagctgagctg
acccaagtggcaattgaactaattggggtcttgacgaattctggaaaagaaactacatta
gcagcaactgatgctgctgctccagcattgaggcgcattgagcgagctgggatagctgct
gctactcctatctcctaccactcaagggaactgatgcagctaatacatgaacacctcctt
gggtctggtttcaccgccactgctgccatgctgcagaaggaggctggccttgcacctttg
ccactgacagcagcagtgcttcctgcccaccaagtttctgccctagaagcatcatctgtt
cagcaacagtggccctctggacgtgtccatggttttctctcagataaaacaaatatatcc
acagatcagtctgcccagagatctgattctgtcctgccttcatctaagaaaaaggcactg
accttctcatctagtttctctcagagaactctatctccgcatcccgtttctcttaataga
gcaagcaacaacccccttaaaagtcctgtacctattgggtctgatactggagatgcagac
acattgcataaaactccgctgtcgctgccacttaagaggaagcttgtggacatgaaggat
cttaattcttcatcagcagcgaagcgctctgcaacagctgatcaaacataccaaccttct
gcattccaaactcctgctcctactcgcaaaggtctgtcggtagcagtagattctcctact
tcctttcattgtggtcggacaaacttcaacaacatttctactgacaacttggacaattct
caaggcacaccgggaacagtgacaaccacagcccatcctggtgtgaatgatcaacaatca
ggaaatttggagcgtatgacacttgactcgctggtggtacaatacttgaaacatcaacat
cgccagtgtcctgctccagttacaactttgccaccactttctctagtgcaccctcatgtt
tgccccgagcccagtcgcagccttagcgcaccagcaaacatagctgctcgtatgggaagc
cgtgagataagtaggcagtttagtggggtccagatacctcgtagggatcgccattttata
tacagtcggttcaagcaatgccgtgtttgccgtgatgaggcatcactgctgacttgcatg
acatttcttggagatgcatctcgagttgcggctggtaaccacacaggtgaattaaaaata
tttgactgcaacacggcaaatctcttagagacccaaacgtgccaccaacatcttgttaca
atgatggagtctacatattctggtggaaatgagctgattctcacatccagcctaaatgag
gttaagatctgggatgccttctcggtatctggggggcctttgcacacatttgaggattgc
aaagctgctaggtttagccactccggaacttcatttgctgccctttctactgatacagct
caacgggagattctattgtacgatgcacagacatacactatttttcagcgccttcctgat
aatactagcaattcaagttcaggccgcggatacgtccaacctattatacattttagtcct
tcagacacaatgttgctttggaatggagtcctgtgggatacacgggaggcaaatcctgtt
catcagtttgaccagttcacagattattgcgggggtggcttccatccagcaggaaacgag
gtgatcttaaactcggaggtgtgggatctgaggaagtttaagcttttgaggagtgtccct
tccctggaccagacagtaataaagtttaatggcactggtgatgttatctatgccatcctg
aggcgtaatcttgacgatgtaacgtcatccatcaatgctcgtagggtcagacatcctctt
ttccctgcattccgcacgattgatgccgtgacttactcggatattgcaactgtccaaatt
gaccgctgtgttcttgatcttgccaccgagcccaatgattctcttatcggggtggttgct
atggacgatcacgaggagctgttctcttctgctcgcttgtttgaagttggcaggaagcga
ataaccgatgatgattcagatccagaggatgcaggtgacaccgatgatgaagatgacgat
gatgatgacaactcagatgatggtgttctgcttgagcctgttctggaaggggaatcagat
tctgacgatctcagtaacagcagcgatgatggtggcgatgatgatattcccagttcagat
gaaatcgaagatgatccagagttcatcgatgacggtgaccttgatggcggagggggcttg
ctggatatcatgggtgatggcgaaggggaggacgacgagagtgatatgattggttccttc
agcagcggagatgaggatggttggatattgtaa
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integrated database retrieval system
