Setaria viridis (green foxtail): 117849682
Help
Entry
117849682 CDS
T07951
Name
(RefSeq) golgin candidate 5
KO
K20286
TATA element modulatory factor
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117849682
Membrane trafficking [BR:
svs04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117849682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
117849682
NCBI-ProteinID:
XP_034587214
LinkDB
All DBs
Position
3:10474424..10484125
Genome browser
AA seq
1037 aa
AA seq
DB search
MAWWSGKVSLGGLQDIAGAVNKISESVKNIEKNFDSALGLEEKRDDEEASGSRTSNSDRM
GFFNPVMAFMGQNGEEDGTDVSEKPQSPKNSSPEEENHSTSTKQRTSEVDASEVSGTIKS
PKQPSKLEEAHSSISTESPVSEQSMTPQTSTHPSAAEEKLDGSAESPISKEEDFEASETS
QSLSHPSPPEETHSGSIEDISSVMNENQDNQDRKHSGPSDEALPNQLGESAGDVPDGTAS
SSPTKIDQSGDTETGESIHTGQEDASDGSPSQSQPAESTLASSDDIIEAEDKIAQKSDAP
KEMSSPQDGSNKVDKTTNLEVKVRDGSINTEKNKEESNKIVAGTASVVGQEENVSEQPVD
FKSKSIIAEHDSHSQNESVVNSTDMPAGLVEDSPANDFKKEEKIQESVGSTNSPTPEFAG
SVAELEKLRREMKMMEAALQGAARQSQSKADEIARLMNENEQLKATIDDLKSKSSEAEMD
ALKDEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEKDEIITQVMAEGEELSK
KQAAQEATIRKLRAQIRELEEEKQRLNSKIQVEETKVESIKRDKAATEKLLQETIERNQT
ELAAQKEFYTNALNAAKEAEALAEARVNSEAKVELESLLREAGEKENMLIKTIEELRHSL
TRQEQEAAFREERLKRDYDDLQKRYQASELRYNELVTQVPESTRPLLRQIEAMQETAARR
EEAWAGVERTLNSRLQEAEAKAAAAEEKERSVNERLSQSLSRITVLETQITILRTEQTQL
SRSLEKERQRASESRQEYLAIKEEAAIQEGRAKQLEEEIKELRARHKKEMQEAAEHRELL
EKDLEREKAARAEIEKTSSREAPKVPLPDQTRNAPLRKLSSSGSINSLEESHFLQASLDL
SDNASLERRMSSESNMSYYLRTMTPSAFESALRQKDGELASYMSRLASLESIRNSLAEEL
VKMTEQCEKLRTEAAALPGLRAELEALKQRHFQALELMGERDEELEELRNDIVDLKEMYR
EQVDLLVSQLQALGARV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtggtcggggaaggtgtcgctgggcgggctgcaggacatcgccggagccgtc
aacaagatcagcgagagcgtgaagaacatcgagaagaacttcgacagcgcgctcggccta
gaggagaagcgcgacgatgaagaagcttctggatcacggacgtccaactctgatagaatg
ggattcttcaatcctgtcatggctttcatgggacaaaatggcgaggaggatggaactgat
gtatcagaaaagccacaatctccaaagaattcgtccccagaggaagaaaatcatagcacc
tccactaagcaacggacatctgaggtagatgcttctgaagtatcaggaacaataaaatct
ccaaagcagccttcaaaattggaagaagctcacagcagcatctccactgagtcacctgtt
tctgagcaatccatgacgccacaaacttcaacacatccttcagcagcagaagaaaagctt
gatggctctgctgagtcacccatatctaaggaggaagattttgaagcatcagaaacgtca
caatctctgtcgcatccttcaccaccggaagaaactcatagtggctccatcgaggatata
agttcagttatgaatgagaaccaggacaatcaagataggaaacattctggccctagtgat
gaagcactgccgaatcagcttggagagtctgctggagacgtccctgatggtacagcatct
tcttcacctaccaaaatagatcagtcaggtgacaccgaaacaggggaatctattcatact
ggtcaggaagacgcatctgatgggagcccctcgcaatcacaaccagcagagtccacgtta
gctagttcagatgatataattgaagctgaggacaagattgctcaaaaatctgatgcccca
aaagaaatgagtagtccacaggatggcagcaataaggtagacaaaactactaatcttgaa
gtcaaagtacgtgatggcagcattaatactgaaaaaaataaggaagaaagcaataagata
gtggcagggacagcatctgttgttggacaggaggagaatgtatcggagcagcccgttgac
ttcaaatcaaagtccataattgcagagcatgattcacattcgcagaatgagtcggtggtc
aattcgacagatatgcctgctggactagtggaagattctcctgcgaatgattttaaaaaa
gaagaaaagattcaggaatctgttggaagcacaaattctccgactccggaatttgctggt
tctgttgctgagctagagaaattaagacgtgaaatgaagatgatggaagctgcattgcaa
ggtgctgcaagacaatcgcagtccaaagctgatgaaattgcaagattgatgaatgagaat
gagcaactcaaagcaacaattgatgatctcaagagtaagtcgtctgaagcagaaatggat
gcgcttaaggatgaatatcaccagagagtagcaactcttgaaaggaaggtgtatgcacta
actaaagaacgggatacactaaggagagaacagaataagaaaagtgatgcagctgccctt
ttgaaagaaaaggatgagattatcactcaggtcatggctgaaggtgaggagttatccaaa
aagcaagctgctcaagaagccacaatacgaaaactgagggcacagattcgtgagcttgaa
gaagaaaaacaacggctgaactcaaagatccaggttgaggagactaaggttgagagcatt
aagagagacaaggcagcaactgagaagttgcttcaagaaacgatagaaagaaatcagact
gaacttgcagctcagaaggaattctacaccaatgctcttaatgcagctaaagaggctgag
gcattggctgaagcaagagtcaacagcgaagccaaagttgaactggagagccttttaaga
gaagctggcgaaaaagaaaatatgctgattaagacaattgaggagttgaggcattctctt
accaggcaagaacaggaggctgctttcagggaagaaaggctaaaaagggactatgacgat
cttcaaaagcggtatcaagccagtgaacttcgttataatgaactggtcacacaagttcct
gagtctaccagaccactcctgaggcaaattgaagcaatgcaggagactgctgctcgtagg
gaggaagcatgggctggtgtggagagaaccttaaactctcgccttcaggaagcagaagct
aaagctgctgctgcagaagaaaaggagcggtctgtaaatgagcgattgtcacaaagttta
tcccggataactgttcttgagacacagattacaattcttagaacagagcagacacagctg
agccgatctcttgagaaggagaggcagagagcatctgaaagtagacaggagtaccttgca
attaaagaggaggcagcgatacaagaaggacgggccaaacaactcgaagaagaaataaag
gagcttagggctaggcacaagaaggagatgcaagaagcagcagaacacagggaactgctt
gagaaggaccttgaaagggaaaaggctgctagggcagaaattgagaagacatcttcccgt
gaagcacctaaagttccacttcctgatcaaacaagaaatgcccctctcagaaagctctct
agttctggaagtataaatagtctggaagaaagccatttccttcaagcatcattggattta
tctgacaatgcttcattagagaggagaatgtcttcagaaagtaatatgtcatattatctg
aggaccatgactccaagtgcttttgaatcagcacttcgtcagaaggatggagagctggct
tcttacatgtcacgcttggcctctttggaatctattcggaattcactggcagaggagttg
gtgaaaatgacagaacaatgtgaaaagttacggacagaagctgctgctctgcctggctta
agggctgaattggaagctctgaaacaaagacactttcaagctctagaacttatgggtgaa
cgtgatgaagagctggaagaactaagaaatgatatcgttgacctaaaagagatgtacagg
gagcaagtggatcttctcgttagccagctccaggcattgggtgctcgtgtatag
DBGET
integrated database retrieval system
