Setaria viridis (green foxtail): 117849708
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Entry
117849708 CDS
T07951
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03020
RNA polymerase
svs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117849708
09124 Replication and repair
03420 Nucleotide excision repair
117849708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117849708
03400 DNA repair and recombination proteins [BR:
svs03400
]
117849708
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117849708
DNA repair and recombination proteins [BR:
svs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117849708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SIR2_2
PspAA
Motif
Other DBs
NCBI-GeneID:
117849708
NCBI-ProteinID:
XP_034587244
LinkDB
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Position
3:complement(47964111..47970555)
Genome browser
AA seq
120 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIVNAASFTIEREDHTIGNIVRMQLHRDPNVLFAG
YKLPHPLQYKIIVRIHTTSQSSPTQAYTQAVNDLDKELEYLKQAFEVEKNRYEERAKQGF
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccggatcgatatgagcgctttgtggtgcccgagggcaccaagaaggtgtcg
tatgagagggatacaaagatcgtgaatgctgcatccttcaccatcgagcgtgaggaccac
accattggcaacattgttcgcatgcagctgcacagggacccaaatgtgctctttgctggc
tataagctccctcaccctcttcagtacaagattattgtcaggatccataccacaagtcag
tcgtccccaacacaggcctacacccaggctgtcaatgacctagacaaggagctcgagtac
cttaagcaagcttttgaggttgagaagaacaggtatgaggaaagggcgaagcaggggttc
tga
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