Setaria viridis (green foxtail): 117849727
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Entry
117849727 CDS
T07951
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117849727
Spliceosome [BR:
svs03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117849727
Other components
Complex C specific factors
117849727
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117849727
NCBI-ProteinID:
XP_034587274
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All DBs
Position
3:48208479..48211283
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AA seq
843 aa
AA seq
DB search
MAEEAEGMDRFDMEGDFEGGRFGRDGEFYYRSRRERAPQTRDDAIYGVFAEGDSDYDSED
DEGSRRRGRRKRRRDGGGEPDLTKPVQFVSTGKFMPTQEPQPEPDQRPGLGRAAAAAAKE
EEAEEEQDDEGDTEMLPTMFGRIREGARARREEKEREREKVARRRQAAGVDAGEPAAALG
SLEANSKVAKMMAMMGYKKGMGLGKNKQGITAPVETTLRPKNAGLGSVEGFKEPKPMMAK
ENLPAPAPPPTSGKKEKRWSKKASTKKAPVMTKNELLAMRAEQEQEEQPTVVQKVIDMRG
PQARVLTDLKGLNEEQEMEANDVPMPELQYNVRLLVDEAKADVLRLDGQLRREQEKVASL
VREKEKVAKQEAAQKRQLQVMEIIAGTLEQVRVDDTAGMLTLDGLLQTFHGLKVQFEEEF
KMCSIAWIACRYAHPLLIRIFQGWQPLQDPKFGLDVMKKWKDLLQGDQPFDFSDGSASMT
PYVQLVSEVILPAVRISGTNSWEAREPEPMLNFLELWDNKKLLPPVLLQSILEHVIMPKL
SAAVDSWDPRRESVPIHVWVHPWLPMLRERIETLCHSIRYKLSTVLHVWQAHDASAYAVL
SPWKDVFDSASWEDLIVRYIIPKLRLALQEFQINPANQKLDQFNWVMLWASAIPVHLMVH
MLEVDFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTAGLDMM
NQAAEGLEVVQPGARENVGYLRATEKRQFDAAQQAYNAVPGAAMADLSFKESIQAYAMEQ
GLLFMPRVGKFYNGMPVYEFGTVSICIDSVKRLLYAQLQEGIERWSAVTLTQLMEMNRMG
RSH
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcggaggggatggaccggttcgacatggagggggacttcgagggcggg
cgattcggccgggacggggagttctactaccggagccggcgggagcgggcgccgcagacc
cgcgacgacgccatctacggggtgttcgcggagggcgactccgactacgactcggaggac
gacgaggggtcccgccgccgcggacgccggaagcgacgcagggacggcggcggggagccc
gacctcaccaagcccgtccagttcgtctccaccggcaagttcatgcccacccaggagccg
cagcccgagcccgaccagcggccggggctcgggcgcgccgccgccgccgctgccaaggag
gaggaggcggaggaggagcaggacgatgagggggacaccgagatgctgccgacgatgttc
ggcaggatcagggagggcgcccgtgcaaggcgggaggagaaggagcgggagcgcgagaag
gtggcgcgccgtcgccaggcggccggggtggatgctggggagccggcggcggccctcggg
agcctggaggctaactccaaggtggccaagatgatggccatgatggggtacaagaaagga
atgggccttggcaagaacaagcaggggatcaccgcgccggtggagaccactttgcggccc
aagaatgccggcctggggagcgttgaggggttcaaggaacccaagcccatgatggctaag
gagaacttgccggccccggctcctccgccgacatcagggaagaaggagaagcgttggtcc
aagaaggctagcacaaagaaagctccggtcatgacgaagaatgagctcctggccatgcgt
gccgagcaggagcaggaggagcagcccacggttgtccagaaggtgattgacatgcgaggg
ccgcaggcgcgggtgctgacggacttgaaggggctcaatgaagaacaagagatggaggcg
aatgatgtgccgatgccggagctgcagtacaatgtgcgcctgcttgttgatgaggctaag
gctgatgttctgaggttggatgggcagctgcgaagggagcaggagaaggtggctagcttg
gtgcgggagaaggaaaaggtggccaagcaggaggcagcacagaaacgccagctgcaggtg
atggagataattgcagggacactagagcaggtccgcgtggatgatacagctggcatgctc
actctggatggattgcttcagacattccatggcttgaaggtgcaatttgaggaggagttc
aagatgtgcagcattgcatggattgcttgcagatatgctcacccactgctaatccggatc
ttccagggatggcaaccccttcaggatccgaagtttgggttagatgtcatgaaaaagtgg
aaggacttgctgcagggggaccaaccatttgacttctcagatggttctgcatcaatgaca
ccatatgtgcagcttgttagtgaagtcatcctgccggctgtgaggatatcaggaactaat
tcatgggaggctagggaaccggaaccaatgctcaactttcttgagttatgggataataag
aagttgctacctcctgttttgcttcaatcaatactagagcatgtcataatgccaaagctc
tcagctgctgtggattcatgggaccctcgcagggaaagtgtgccgatccatgtctgggta
cacccatggttgccaatgctaagggaaaggatagagaccttgtgccattctattcgatac
aagttgagcactgtcctccatgtgtggcaagcacatgatgcttccgcgtatgctgtgttg
tctccgtggaaggatgtgtttgattcggccagctgggaagacctgattgtgcggtatatc
attcctaaactgagattggcactgcaagaatttcagatcaacccagcaaaccagaaactt
gatcagttcaactgggtgatgctgtgggcatctgcaatcccagtacacctcatggtccac
atgttggaagttgacttcttcagcaagtggcagcaggtcctataccattggttgtgctca
ccaaatcctgattttaatgagataatgaactggtataagggctggaagggccttttccca
ccagagttacttgccaatgagcgcatacggatgcttctaactgctggtcttgacatgatg
aaccaagctgctgaaggacttgaggtggtgcagcctggggctagggaaaatgtgggctac
ttgagagcaactgagaagcgacaatttgatgcagcacagcaggcttacaatgctgtgcca
ggggcagccatggcggatttgagcttcaaggagtctatccaggcatatgcaatggagcaa
ggtttgctgtttatgcctagagttggcaagttctacaatggcatgccggtatatgagttc
ggcaccgttagtatttgcatagactctgtgaagcgactactgtatgcgcaacttcaagag
ggaattgagagatggagtgctgtaactcttacacaattgatggaaatgaaccgaatggga
agatcacactaa
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