Setaria viridis (green foxtail): 117849776
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Entry
117849776 CDS
T07951
Name
(RefSeq) probable protein transport Sec1a isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117849776
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117849776
Membrane trafficking [BR:
svs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117849776
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117849776
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117849776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
117849776
NCBI-ProteinID:
XP_034587343
LinkDB
All DBs
Position
1:complement(19671787..19688021)
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AA seq
661 aa
AA seq
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MSLDSDTSSQGGDHRSFRHITRDRLLFEMLRSTRKNSKSTWKVLIMDKFTVKIMSYACKM
ADITEEGVSLVEDLYKRRQPLPSLDAIYFIQPTKENIVMFLSDMSGRSPLYKKAYVFFSS
PVHKELVAQIKKDSSVLPRIGALSEMNLEYFAIDSQGFTTDHERALEELFSENAEGSHKY
NACLNTMATRISTVFASMREFPRVHYRVAKTIDASTMTTLRDLVPTKLAAGVWNCLAKYK
TTIPEFPQTETCELLIVDRSIDQIAPIIHEWTYDAMCHDLLCMDGNKYVHEVPSKNGSAT
EKKEVLLEDHDPIWLELRHAHIADASERLHDKMTNFVSKNKAAQLHQASRNGGEVSTRDL
QKMVQALPQYSDQIDKLSLHVEIAGKLNNIIREQCLRDVGQLEQDLVFGDAGTKELINFL
RTQLGVSRENKLRLLMIYAALNPEKFESDKGAKLMQLAGLSVDDMIAVNNMRCLCGPDTK
KSSGGGFTLKFDVHKKKHAHRKERTWEESAWALSRFYPVLEELIEKLSKGELPKDEYNCM
NDPSPSAHGVPTSSSVRTSPAHSMRSRRTGGTWARPRGSDDGYSSDSVLKHASSDFKKLG
QRIFVFVIGGATRSELRAAHKLSSKLKREVILGSSSLDDPPQFITKLKLMSAELSLDDLQ
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggattcggacacctcctcgcagggcggggaccacaggagcttccgccatatc
acgcgagatcgtctattatttgaaatgctaagatcaactaggaagaattcgaaatcaaca
tggaaggttcttatcatggataagtttacagtcaagattatgtcgtatgcatgtaagatg
gcagatatcacagaagaaggggtttcattggtcgaagatttatataaacggaggcaacca
ttgccgtcactggatgccatatatttcatccaaccaactaaagaaaacattgtcatgttc
ctatctgacatgtcaggaagaagccctttgtacaagaaggcatatgtgtttttcagttct
cccgtacataaagaattagttgctcaaataaagaaggattcaagtgtactacctcgtatc
ggcgcacttagtgagatgaatctggagtactttgctattgattcccagggtttcacaact
gaccatgagagggcattggaagaactttttagcgaaaatgcagaagggtctcacaagtac
aatgcttgtctgaacacaatggctactcgtatatctacagtatttgcatcaatgagggaa
ttcccccgtgtacactaccgtgttgccaagacaattgatgcttctacaatgacaacacta
cgagacttggtccccacaaagcttgctgctggtgtgtggaattgtcttgcgaagtataaa
acgacaatacctgaatttcctcaaacagaaacatgtgaattacttatagtagaccgttca
atagaccagattgcgccaattattcatgaatggacgtatgatgccatgtgccatgatctg
ctatgtatggatggcaacaagtatgttcatgaggttccaagtaaaaatgggtcagcaact
gaaaaaaaggaggtcctgttagaagatcatgaccctatctggcttgagcttaggcatgcc
catatagcagatgcaagcgagaggcttcatgataagatgaccaacttcgtttcaaagaac
aaagcagcacaactgcaccaagcaagcagaaacggtggagaagtatctacaagagattta
caaaaaatggttcaggctcttccacagtacagcgatcaaattgacaagctttccctgcat
gttgagattgcaggaaaactcaataacataatacgggagcaatgtctgcgggatgttgga
cagctagaacaagatcttgtgtttggcgatgctggaacgaaagaactaatcaattttttg
agaacacaattgggtgtaagtcgtgaaaataagttgcgcttgctgatgatttatgcagca
cttaacccggagaagttcgaaagcgacaagggtgcaaaattgatgcagttggcaggatta
tctgttgatgacatgattgctgtaaataatatgcgttgcttatgtgggcctgatacaaaa
aagtcctcaggaggaggttttacactaaaatttgatgttcataagaagaaacatgcacat
cgaaaagagcgaacatgggaagaatcagcatgggcgctctcccgattttatcctgtttta
gaggaattgattgagaagcttagcaaaggtgagctgccaaaagatgaatataactgtatg
aacgaccctagtcctagtgctcatggagtgccaaccagtagctctgtccgaacaagtcca
gctcactcaatgcgatctagacgaacaggtggcacatgggccagacctcgtggatctgat
gatggatactcaagtgattctgtgttgaagcatgcatccagtgacttcaaaaaacttggg
cagcgtatatttgtttttgtaattggcggtgctactcgttcagagttacgtgctgcacac
aaactttcgtccaagctgaagcgggaggtcatccttggttcatctagccttgacgatccc
ccccaattcatcacaaaactgaagttgatgtcagcagaactgtcacttgatgatcttcag
atataa
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