Setaria viridis (green foxtail): 117849795
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Entry
117849795 CDS
T07951
Name
(RefSeq) uncharacterized protein isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svs03016
]
117849795
Enzymes [BR:
svs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
117849795
Transfer RNA biogenesis [BR:
svs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117849795
Prokaryotic type
117849795
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
117849795
NCBI-ProteinID:
XP_034587375
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All DBs
Position
3:4436248..4440690
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AA seq
493 aa
AA seq
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MPRPGAMAAAAALLPSSSSQLLRLPRRFLSLTATPYPLYYDLIVHRPADPKPPRSSSDAG
GDRQPQSAPDEQTLDRAKRRYLRKRRSRLLPDPDAGAKPSSSSSSEFVELRPEVVDFPRL
HAREEALYFHDTFAMPWEKDKHYRMLYRLEKKYFPHQSLDNAFVPADAGPTSDADRGLVF
FDDEKKEDDGEDRVVDKKDGDNDKGEVLERKVEDFFRSLRKGPGEAEAKAKRPAAARAEP
RQVKREVPREEERPQPYLVTRTTELPPRWDGPGGTVVLIDKPKGWTSFTVCGKLRRLVKV
KKVGHAGTLDPMATGLLIVCVGKATKIVDCYQGMVKGYSGVFRLGEATSTWDADSPVIQR
EPWEHIKDGDIRKAAASFKGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRRISIYQ
FDIERSLEDRQNLIFRVTCSKGTYIRSLCADLGKALGSCAHLTALRRDSIGEYKVNDAWN
FDELEEQINKGYL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaccgggagccatggcggcggcggcggcgctgctgccatcctcctcgtcgcag
ctgctccgtctcccacgccgcttcctctcgctcaccgcgactccctacccgctctactac
gatctcatcgtccaccgccccgccgaccccaagccccccagatcctcctccgacgccggc
ggcgaccgccagccgcagtccgccccagacgagcagacgctcgaccgggccaagcgccgg
tacctccgcaagcgccgcagccgcctcctcccggacccggacgccggcgccaagccctcc
tcgtcctcctcgtcggagttcgtcgagctccggccggaggtggtggacttcccgcggctc
cacgcgcgcgaggaggcgctctacttccacgacaccttcgccatgccgtgggagaaggac
aagcactaccgcatgctctaccgcctcgagaagaagtacttcccccaccagtcgctggac
aacgcattcgtccccgccgacgccgggccgacctccgacgccgacaggggcctcgtcttc
ttcgacgacgagaaaaaggaagacgacggagaggaccgggtggtcgataagaaggacggc
gacaacgacaaaggggaggtgctggagaggaaggtggaagacttcttcaggtctctgagg
aagggccccggcgaagccgaggcgaaggccaagagaccggcggcagcgcgagcggagccg
cggcaggtgaagcgcgaggtgccaagggaggaggaacggccgcagccatatctcgtgacc
aggacgacggagctgccaccgagatgggacgggccgggcgggaccgtcgtgctcatcgac
aagcccaaaggatggacttcgtttactgtttgtggaaagttgcggcgcttagtcaaagtg
aaaaaggttggacatgctggtactctggaccccatggcaactggattgttgattgtttgt
gtaggaaaagcaaccaaaatagtcgattgctaccaaggaatggttaaaggttatagcggt
gttttccgacttggagaagccacatcaacctgggatgcagattcaccagttatccagagg
gaaccatgggaacacatcaaagatggagatattagaaaggcagcagcatcattcaagggt
gagatatggcaagttcctccgatgttttctgccattaaggttggcggtgaaaagatgtat
gacaaagcaaggaggggtgaaacagtagagctttcaccaagacgtatatcaatataccag
tttgacattgagcgcagtttggaagacagacagaatttgatatttcgagttacttgctca
aaaggaacatatattcggtccctctgtgcagacttagggaaagcacttggcagctgtgct
catttaactgccttgcggagagactcaatcggtgaatacaaagtcaatgatgcttggaac
tttgatgaactggaagaacaaattaacaagggatatttatga
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